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Report for CCDS8827.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8827.1 Public Homo sapiens 12 KRT75 24 110 108 CCDS HistoryNCBI Gene:9119Re-query CCDS DB by CCDS ID:8827.1See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8827.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000252245.6 ENSP00000252245.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000252245.6Link to Ensembl Protein Viewer:ENSP00000252245.5Re-query CCDS DB by Nucleotide ID:ENST00000252245Re-query CCDS DB by Protein ID:ENSP00000252245
Original member Current member NCBI NM_004693.3 NP_004684.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004693.3Link to Protein Sequence:NP_004684.2Re-query CCDS DB by Nucleotide ID:NM_004693Re-query CCDS DB by Protein ID:NP_004684Link to BLAST:NP_004684.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004684.2 551 O95678 551 100% 0 0

Chromosomal Locations for CCDS 8827.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 52424517 52424755 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52426817 52426851 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52428256 52428476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52428618 52428743 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52430541 52430705 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52431543 52431638 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52432006 52432066 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52433038 52433252 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52433807 52434304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1656 nt):
ATGTCTCGGCAGTCCTCCATCACCTTCCAGTCTGGCAGCCGCAGGGGCTTCAGCACCACCTCGGCCATCA
CCCCGGCAGCTGGCCGCTCCCGCTTCAGCTCTGTCTCTGTGGCCCGCTCTGCAGCAGGGAGTGGGGGCCT
GGGAAGGATCAGCAGTGCTGGGGCCAGCTTTGGAAGCCGCAGCCTCTACAACCTGGGGGGTGCCAAGCGG
GTCTCCATCAATGGGTGTGGCAGCAGCTGCCGAAGTGGCTTTGGTGGCAGGGCCAGCAACAGGTTTGGAG
TCAACAGTGGATTTGGCTATGGGGGTGGAGTTGGAGGAGGCTTCAGTGGCCCCAGCTTCCCCGTGTGTCC
CCCTGGAGGCATCCAAGAGGTCACTGTCAACCAGAGTCTCCTGACTCCTCTTCACCTGCAAATCGACCCC
ACCATCCAGCGGGTGCGGGCCGAGGAGCGCGAGCAGATCAAGACCCTCAACAATAAGTTCGCCTCCTTCA
TCGACAAGGTGAGGTTCTTGGAGCAGCAGAACAAGGTCCTGGAGACCAAGTGGGCCCTCCTGCAGGAGCA
GGGCTCCAGGACTGTGAGGCAGAACCTAGAGCCCCTCTTTGATTCCTATACCAGTGAGCTCCGACGGCAG
CTGGAAAGCATCACCACCGAGAGGGGCAGGCTTGAAGCTGAACTGAGGAACATGCAGGATGTTGTGGAAG
ATTTCAAAGTCAGGTACGAAGATGAAATTAACAAGCGCACAGCTGCTGAGAATGAATTTGTAGCCCTGAA
AAAGGACGTAGATGCTGCCTATATGAACAAGGTGGAGCTGGAAGCCAAGGTCAAATCTCTGCCCGAGGAG
ATCAACTTCATCCACTCAGTCTTTGATGCAGAGCTGTCCCAGTTGCAGACCCAGGTCGGTGACACATCCG
TGGTGCTGTCCATGGACAACAACCGCAACCTGGACCTGGATAGTATCATCGCCGAGGTCAAAGCACAATA
CGAGGACATTGCCAACCGCAGCCGGGCCGAGGCTGAGTCCTGGTACCAGACCAAGTACGAGGAGCTGCAG
GTCACCGCAGGCAGACATGGGGATGACCTTCGAAACACCAAACAAGAGATCTCTGAAATGAACCGCATGA
TCCAGAGGCTGAGAGCTGAGATTGACAGCGTCAAGAAGCAGTGTTCCAGCTTGCAAACGGCCATTGCTGA
TGCAGAGCAGCGGGGAGAACTGGCTCTCAAGGATGCACGGGCCAAGCTGGTGGACCTTGAGGAGGCCCTG
CAGAAGGCCAAGCAGGACATGGCTCGGCTCCTGCGTGAGTACCAGGAGCTGATGAACATCAAGCTGGCCC
TGGACGTGGAGATCGCCACCTACCGCAAGCTGCTGGAAGGCGAGGAGTGCAGGTTGAGTGGAGAGGGAGT
TTCTCCAGTTAACATTTCTGTGGTCACCTCTACTCTTTCCAGTGGCTATGGAAGCGGCAGCAGCATTGGA
GGTGGAAACCTGGGCCTCGGTGGGGGCAGCGGCTACTCCTTCACCACCAGTGGTGGGCATAGCCTGGGTG
CAGGCCTGGGAGGTTCTGGATTCAGTGCCACCAGCAACCGGGGCTTAGGGGGCAGTGGTTCTAGCGTCAA
GTTTGTCTCCACCACATCCTCCAGCCAGAAGAGCTACACGCACTAA

Translation (551 aa):
MSRQSSITFQSGSRRGFSTTSAITPAAGRSRFSSVSVARSAAGSGGLGRISSAGASFGSRSLYNLGGAKR
VSINGCGSSCRSGFGGRASNRFGVNSGFGYGGGVGGGFSGPSFPVCPPGGIQEVTVNQSLLTPLHLQIDP
TIQRVRAEEREQIKTLNNKFASFIDKVRFLEQQNKVLETKWALLQEQGSRTVRQNLEPLFDSYTSELRRQ
LESITTERGRLEAELRNMQDVVEDFKVRYEDEINKRTAAENEFVALKKDVDAAYMNKVELEAKVKSLPEE
INFIHSVFDAELSQLQTQVGDTSVVLSMDNNRNLDLDSIIAEVKAQYEDIANRSRAEAESWYQTKYEELQ
VTAGRHGDDLRNTKQEISEMNRMIQRLRAEIDSVKKQCSSLQTAIADAEQRGELALKDARAKLVDLEEAL
QKAKQDMARLLREYQELMNIKLALDVEIATYRKLLEGEECRLSGEGVSPVNISVVTSTLSSGYGSGSSIG
GGNLGLGGGSGYSFTTSGGHSLGAGLGGSGFSATSNRGLGGSGSSVKFVSTTSSSQKSYTH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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