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Report for CCDS10511.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10511.1 Public Homo sapiens 16 GLIS2 24 110 108 CCDS HistoryNCBI Gene:84662Re-query CCDS DB by CCDS ID:10511.1See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10511.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000262366.7 ENSP00000262366.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000262366.7Link to Ensembl Protein Viewer:ENSP00000262366.3Re-query CCDS DB by Nucleotide ID:ENST00000262366Re-query CCDS DB by Protein ID:ENSP00000262366
Original member Current member EBI ENST00000433375.2 ENSP00000395547.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000433375.2Link to Ensembl Protein Viewer:ENSP00000395547.1Re-query CCDS DB by Nucleotide ID:ENST00000433375Re-query CCDS DB by Protein ID:ENSP00000395547
Original member Current member NCBI NM_001318918.2 NP_001305847.1 Accepted alive Link to Nucleotide Sequence:NM_001318918.2Link to Protein Sequence:NP_001305847.1Re-query CCDS DB by Nucleotide ID:NM_001318918Re-query CCDS DB by Protein ID:NP_001305847Link to BLAST:NP_001305847.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001305847.1 524 Q9BZE0 524 100% 0 0

Chromosomal Locations for CCDS 10511.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 4332281 4332452 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4333347 4333519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4334801 4334977 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4335060 4335193 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4335275 4335393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4336725 4337524 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1575 nt):
ATGCACTCCCTGGACGAGCCGCTCGACCTGAAGCTGAGTATCACCAAGCTCCGGGCGGCAAGAGAGAAGC
GGGAGAGGACGCTGGGTGTGGTCCGGCCCCGTGCTCTGCACAGGGAGCTGGGCCTGGTGGATGACAGCCC
CACACCTGGCTCTCCAGGCTCCCCGCCCTCAGGCTTCCTGCTGAACTCCAAGTTCCCCGAGAAGGTGGAG
GGACGCTTTTCAGCAGCCCCTCTCGTGGACCTCAGCCTGTCACCACCATCTGGGCTGGACTCCCCCAATG
GCAGCAGCTCGCTGTCCCCCGAGCGCCAGGGCAACGGGGACCTGCCTCCAGTGCCCAGTGCCTCGGACTT
CCAGCCACTGCGCTATTTGGATGGTGTCCCCAGCTCCTTCCAGTTCTTCCTGCCCCTCGGCTCCGGGGGG
GCCCTGCACCTGCCTGCCTCCTCCTTCCTTACCCCTCCCAAGGACAAGTGCCTCTCGCCAGACCTGCCCC
TGCCCAAGCAGCTGGTGTGTCGCTGGGCCAAGTGTAACCAGCTCTTTGAGCTCCTGCAAGACCTGGTGGA
CCATGTCAACGATTACCATGTCAAGCCCGAGAAGGATGCGGGGTACTGCTGCCACTGGGAGGGCTGCGCC
CGCCATGGCCGAGGTTTCAACGCCAGGTACAAGATGCTCATCCACATCCGCACACACACCAACGAGAAGC
CACACCGCTGTCCGACCTGCAGCAAGAGCTTCTCCCGCCTGGAGAACCTGAAGATCCACAACCGGTCGCA
CACAGGTGAGAAGCCCTACGTCTGCCCCTACGAGGGCTGCAACAAGCGCTATTCCAACTCCAGTGACCGC
TTTAAGCACACGCGCACCCACTATGTGGACAAGCCCTACTACTGCAAGATGCCCGGCTGCCACAAGCGCT
ACACGGACCCCAGCTCACTGCGCAAGCACATCAAGGCCCATGGCCACTTTGTGTCCCACGAGCAGCAAGA
GCTCCTGCAGCTGCGCCCACCCCCCAAGCCGCCACTGCCCGCCCCCGACGGCGGCCCCTATGTCAGTGGG
GCCCAGATCATCATCCCCAACCCAGCTGCCCTCTTTGGAGGCCCTGGCCTGCCCGGCTTACCCCTACCCC
TGGCCCCCGGCCCCCTTGACCTCAGTGCCCTGGCCTGTGGCAACGGTGGGGGCAGTGGGGGTGGGGGGGG
CATGGGCCCTGGGCTGCCAGGCCCCGTCCTGCCTCTCAATCTGGCCAAGAACCCGCTGCTGCCCTCGCCC
TTTGGGGCTGGCGGACTGGGCTTGCCTGTGGTCTCCCTCCTTGCTGGCGCAGCTGGTGGCAAGGCCGAGG
GGGAGAAGGGGCGTGGGTCGGTGCCCACCAGGGCCCTGGGCATGGAGGGCCACAAGACGCCCCTTGAAAG
GACGGAGAGCAGCTGCTCCCGGCCAAGCCCCGATGGACTCCCCCTGCTGCCAGGCACCGTGCTGGACCTG
TCCACGGGCGTCAACTCAGCTGCCAGCAGCCCAGAGGCGTTGGCCCCTGGCTGGGTGGTCATCCCGCCGG
GCTCGGTGCTGCTCAAACCGGCTGTGGTGAACTGA

Translation (524 aa):
MHSLDEPLDLKLSITKLRAAREKRERTLGVVRPRALHRELGLVDDSPTPGSPGSPPSGFLLNSKFPEKVE
GRFSAAPLVDLSLSPPSGLDSPNGSSSLSPERQGNGDLPPVPSASDFQPLRYLDGVPSSFQFFLPLGSGG
ALHLPASSFLTPPKDKCLSPDLPLPKQLVCRWAKCNQLFELLQDLVDHVNDYHVKPEKDAGYCCHWEGCA
RHGRGFNARYKMLIHIRTHTNEKPHRCPTCSKSFSRLENLKIHNRSHTGEKPYVCPYEGCNKRYSNSSDR
FKHTRTHYVDKPYYCKMPGCHKRYTDPSSLRKHIKAHGHFVSHEQQELLQLRPPPKPPLPAPDGGPYVSG
AQIIIPNPAALFGGPGLPGLPLPLAPGPLDLSALACGNGGGSGGGGGMGPGLPGPVLPLNLAKNPLLPSP
FGAGGLGLPVVSLLAGAAGGKAEGEKGRGSVPTRALGMEGHKTPLERTESSCSRPSPDGLPLLPGTVLDL
STGVNSAASSPEALAPGWVVIPPGSVLLKPAVVN


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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