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Report for CCDS11774.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11774.1 Public Homo sapiens 17 CHMP6 24 110 108 CCDS HistoryNCBI Gene:79643Re-query CCDS DB by CCDS ID:11774.1See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11774.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000325167.9 ENSP00000317468.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000325167.9Link to Ensembl Protein Viewer:ENSP00000317468.5Re-query CCDS DB by Nucleotide ID:ENST00000325167Re-query CCDS DB by Protein ID:ENSP00000317468
Original member Current member NCBI NM_024591.5 NP_078867.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024591.5Link to Protein Sequence:NP_078867.2Re-query CCDS DB by Nucleotide ID:NM_024591Re-query CCDS DB by Protein ID:NP_078867Link to BLAST:NP_078867.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_078867.2 201 Q96FZ7 201 100% 0 0

Chromosomal Locations for CCDS 11774.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 80991919 80991981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 80994581 80994690 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 80995019 80995106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 80995672 80995758 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 80997007 80997072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 80997261 80997341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 80998366 80998420 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 80999098 80999153 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (606 nt):
ATGGGTAACCTGTTCGGCCGCAAGAAGCAGAGCCGCGTCACGGAGCAGGACAAGGCCATCCTGCAACTGA
AGCAGCAGCGGGACAAGCTGAGGCAGTACCAGAAGAGGATCGCCCAGCAGCTGGAGCGCGAGCGCGCCCT
GGCCCGGCAGCTGCTGCGGGACGGCAGGAAGGAACGGGCCAAGCTGCTGCTCAAGAAGAAGCGATACCAG
GAGCAGCTCCTGGACAGGACGGAGAACCAGATCAGCAGCCTGGAGGCCATGGTTCAGAGTATTGAGTTCA
CCCAGATCGAAATGAAAGTGATGGAGGGGCTGCAGTTTGGAAATGAGTGTCTGAACAAGATGCACCAGGT
GATGTCCATTGAAGAGGTGGAGAGGATCCTGGACGAGACGCAGGAGGCCGTGGAGTACCAGCGGCAAATA
GACGAGCTCCTGGCAGGAAGCTTCACTCAGGAGGATGAAGACGCCATCCTGGAGGAGCTGAGCGCAATCA
CTCAGGAACAAATAGAGCTGCCAGAGGTTCCCTCCGAGCCCCTTCCTGAGAAGATCCCAGAAAACGTCCC
TGTCAAGGCCAGGCCCAGGCAGGCGGAGCTGGTGGCAGCTTCGTAA

Translation (201 aa):
MGNLFGRKKQSRVTEQDKAILQLKQQRDKLRQYQKRIAQQLERERALARQLLRDGRKERAKLLLKKKRYQ
EQLLDRTENQISSLEAMVQSIEFTQIEMKVMEGLQFGNECLNKMHQVMSIEEVERILDETQEAVEYQRQI
DELLAGSFTQEDEDAILEELSAITQEQIELPEVPSEPLPEKIPENVPVKARPRQAELVAAS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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