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Report for CCDS8911.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8911.1 Public Homo sapiens 12 NABP2 24 110 108 CCDS HistoryNCBI Gene:79035Re-query CCDS DB by CCDS ID:8911.1See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8911.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000267023.9 ENSP00000267023.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000267023.9Link to Ensembl Protein Viewer:ENSP00000267023.4Re-query CCDS DB by Nucleotide ID:ENST00000267023Re-query CCDS DB by Protein ID:ENSP00000267023
Original member Current member EBI ENST00000341463.5 ENSP00000368862.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000341463.5Link to Ensembl Protein Viewer:ENSP00000368862.3Re-query CCDS DB by Nucleotide ID:ENST00000341463Re-query CCDS DB by Protein ID:ENSP00000368862
Original member Current member EBI ENST00000380198.6 ENSP00000369545.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000380198.6Link to Ensembl Protein Viewer:ENSP00000369545.2Re-query CCDS DB by Nucleotide ID:ENST00000380198Re-query CCDS DB by Protein ID:ENSP00000369545
Original member Current member NCBI NM_024068.4 NP_076973.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024068.4Link to Protein Sequence:NP_076973.1Re-query CCDS DB by Nucleotide ID:NM_024068Re-query CCDS DB by Protein ID:NP_076973Link to BLAST:NP_076973.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_076973.1 211 Q9BQ15-1 211 100% 0 0

Chromosomal Locations for CCDS 8911.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 56224857 56224935 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 56225373 56225511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 56225624 56225695 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 56226179 56226260 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 56226356 56226419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 56229014 56229213 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (636 nt):
ATGACGACGGAGACCTTTGTGAAGGATATCAAGCCTGGGCTCAAGAATCTGAACCTTATCTTCATTGTGC
TGGAGACAGGCCGAGTGACCAAGACAAAGGACGGGCATGAGGTTCGGACCTGCAAAGTGGCGGACAAAAC
AGGCAGCATCAATATCTCTGTCTGGGACGATGTTGGCAATCTGATCCAGCCTGGGGACATTATCCGGCTC
ACCAAAGGGTACGCTTCAGTTTTCAAAGGTTGTCTGACACTATATACTGGCCGTGGGGGTGATCTGCAGA
AGATTGGAGAATTCTGTATGGTTTATTCTGAGGTTCCTAACTTCAGTGAGCCAAACCCAGAGTACAGCAC
CCAGCAGGCACCCAACAAGGCGGTGCAGAACGACAGCAACCCTTCAGCTTCCCAGCCTACCACTGGACCC
TCTGCTGCCTCTCCAGCCTCTGAGAACCAGAATGGGAATGGACTGAGTGCCCCACCAGGTCCCGGTGGTG
GCCCACATCCCCCTCATACTCCCTCCCACCCACCCAGCACCCGAATCACTCGAAGCCAGCCCAACCACAC
ACCTGCAGGCCCGCCTGGCCCTTCCAGCAACCCTGTTAGTAACGGCAAAGAAACCCGGAGGAGCAGCAAG
AGATAG

Translation (211 aa):
MTTETFVKDIKPGLKNLNLIFIVLETGRVTKTKDGHEVRTCKVADKTGSINISVWDDVGNLIQPGDIIRL
TKGYASVFKGCLTLYTGRGGDLQKIGEFCMVYSEVPNFSEPNPEYSTQQAPNKAVQNDSNPSASQPTTGP
SAASPASENQNGNGLSAPPGPGGGPHPPHTPSHPPSTRITRSQPNHTPAGPPGPSSNPVSNGKETRRSSK
R


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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