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Report for CCDS33237.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33237.1 Public Homo sapiens 2 RNF103 24 110 108 CCDS HistoryNCBI Gene:7844Re-query CCDS DB by CCDS ID:33237.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33237.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000237455.5 ENSP00000237455.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000237455.5Link to Ensembl Protein Viewer:ENSP00000237455.4Re-query CCDS DB by Nucleotide ID:ENST00000237455Re-query CCDS DB by Protein ID:ENSP00000237455
Original member Current member NCBI NM_005667.4 NP_005658.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005667.4Link to Protein Sequence:NP_005658.1Re-query CCDS DB by Nucleotide ID:NM_005667Re-query CCDS DB by Protein ID:NP_005658Link to BLAST:NP_005658.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005658.1 685 O00237 685 100% 0 0

Chromosomal Locations for CCDS 33237.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 86603843 86605418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 86612159 86612274 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 86620330 86620469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 86622661 86622886 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2058 nt):
ATGTGGCTGAAGCTTTTTTTCTTGCTCCTCTATTTCCTGGTCCTGTTCGTCCTGGCCAGGTTTTTTGAGG
CCATTGTGTGGTATGAAACTGGCATCTTTGCCACCCAGCTGGTGGATCCGGTGGCGCTGAGCTTCAAGAA
GCTGAAGACCATTTTGGAGTGCCGGGGGTTGGGCTACTCAGGGTTGCCCGAGAAGAAGGATGTCCGGGAG
CTGGTGGAAAAGTCAGGTGACTTGATGGAGGGTGAGCTCTATTCTGCTCTCAAGGAAGAAGAAGCATCCG
AATCGGTTTCTAGTACCAATTTCAGTGGTGAAATGCACTTCTATGAGCTTGTGGAAGACACAAAAGATGG
CATCTGGCTGGTTCAGGTCATAGCAAATGACAGAAGTCCCTTGGTGGGCAAAATTCACTGGGAGAAAATG
GTTAAAAAGGTGTCAAGATTTGGAATACGTACAGGCACATTTAACTGTTCCAGTGATCCCAGATATTGCA
GGAGAAGAGGCTGGGTCCGATCCACACTCATTATGTCTGTTCCACAAACAAGTACTTCAAAAGGGAAAGT
CATGCTTAAAGAATACAGTGGACGCAAGATTGAAGTAGAGCACATTTTTAAATGGATAACTGCTCATGCA
GCTTCTCGGATCAAAACCATTTATAATGCTGAACACTTGAAAGAAGAATGGAATAAAAGTGATCAGTATT
GGTTAAAAATATACCTATTTGCAAACCTTGACCAGCCCCCAGCTTTCTTCTCTGCACTAAGTATAAAGTT
TACTGGAAGAGTTGAGTTTATTTTTGTTAATGTAGAAAATTGGGACAACAAGAGTTATATGACAGATATT
GGCATATATAATATGCCATCATACATACTTAGAACTCCTGAAGGAATTTACAGGTATGGAAACCACACAG
GCGAATTTATATCCCTTCAGGCCATGGATTCATTTTTGCGCTCATTACAACCCGAGGTAAATGATCTGTT
TGTTTTGAGCTTGGTTCTAGTTAATCTTATGGCTTGGATGGACTTATTTATTACACAAGGAGCTACCATA
AAGCGATTTGTGGTTCTCATAAGCACTTTAGGGACATATAATTCTCTATTAATTATTTCCTGGCTACCTG
TGTTGGGCTTTTTACAGCTACCTTACTTAGATAGCTTTTATGAATATAGCTTAAAATTGTTGAGATATTC
CAATACAACCACACTGGCTTCATGGGTAAGGGCAGACTGGATGTTTTACTCTTCACACCCAGCCCTGTTT
CTCAGTACATACCTTGGTCATGGTTTACTAATTGATTACTTTGAGAAGAAGAGAAGGCGCAACAACAACA
ATGATGAAGTCAATGCCAATAACTTAGAATGGTTATCAAGTCTGTGGGACTGGTACACCAGCTACCTCTT
CCACCCGATTGCTTCTTTTCAGAACTTTCCTGTAGAATCTGATTGGGACGAAGACCCTGACTTATTCTTG
GAGCGCTTAGCTTTCCCTGACCTTTGGCTTCACCCTCTGATACCAACTGATTATATTAAAAACTTACCAA
TGTGGCGATTTAAATGTCTTGGAGTCCAGTCTGAAGAGGAAATGTCGGAGGGGTCTCAAGATACTGAAAA
TGACTCGGAAAGTGAGAACACAGACACTTTGAGTAGTGAGAAGGAAGTATTTGAAGATAAGCAAAGCGTA
CTTCACAATTCTCCAGGAACAGCAAGTCACTGTGATGCTGAGGCTTGTTCATGTGCCAATAAATATTGTC
AGACCAGCCCATGTGAAAGGAAGGGGAGGTCATATGGATCATATAACACTAATGAAGATATGGAACCTGA
TTGGTTAACTTGGCCTGCTGATATGCTGCACTGTACTGAATGTGTTGTTTGCCTAGAGAATTTTGAAAAT
GGATGTTTGCTAATGGGGTTGCCTTGTGGTCATGTGTTTCATCAGAATTGCATTGTGATGTGGTTGGCTG
GGGGCCGACATTGTTGCCCTGTTTGCCGGTGGCCTTCTTATAAAAAAAAGCAGCCATATGCACAACACCA
GCCCTTGTCAAATGATGTCCCATCTTAA

Translation (685 aa):
MWLKLFFLLLYFLVLFVLARFFEAIVWYETGIFATQLVDPVALSFKKLKTILECRGLGYSGLPEKKDVRE
LVEKSGDLMEGELYSALKEEEASESVSSTNFSGEMHFYELVEDTKDGIWLVQVIANDRSPLVGKIHWEKM
VKKVSRFGIRTGTFNCSSDPRYCRRRGWVRSTLIMSVPQTSTSKGKVMLKEYSGRKIEVEHIFKWITAHA
ASRIKTIYNAEHLKEEWNKSDQYWLKIYLFANLDQPPAFFSALSIKFTGRVEFIFVNVENWDNKSYMTDI
GIYNMPSYILRTPEGIYRYGNHTGEFISLQAMDSFLRSLQPEVNDLFVLSLVLVNLMAWMDLFITQGATI
KRFVVLISTLGTYNSLLIISWLPVLGFLQLPYLDSFYEYSLKLLRYSNTTTLASWVRADWMFYSSHPALF
LSTYLGHGLLIDYFEKKRRRNNNNDEVNANNLEWLSSLWDWYTSYLFHPIASFQNFPVESDWDEDPDLFL
ERLAFPDLWLHPLIPTDYIKNLPMWRFKCLGVQSEEEMSEGSQDTENDSESENTDTLSSEKEVFEDKQSV
LHNSPGTASHCDAEACSCANKYCQTSPCERKGRSYGSYNTNEDMEPDWLTWPADMLHCTECVVCLENFEN
GCLLMGLPCGHVFHQNCIVMWLAGGRHCCPVCRWPSYKKKQPYAQHQPLSNDVPS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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