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Report for CCDS54122.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
54122.1 Public Homo sapiens 17 KRTAP2-2 24 110 108 CCDS HistoryNCBI Gene:728279Re-query CCDS DB by CCDS ID:54122.1See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 54122.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000398477.1 ENSP00000381494.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000398477.1Link to Ensembl Protein Viewer:ENSP00000381494.1Re-query CCDS DB by Nucleotide ID:ENST00000398477Re-query CCDS DB by Protein ID:ENSP00000381494
Original member Current member NCBI NM_033032.3 NP_149021.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_033032.3Link to Protein Sequence:NP_149021.2Re-query CCDS DB by Nucleotide ID:NM_033032Re-query CCDS DB by Protein ID:NP_149021Link to BLAST:NP_149021.2

Chromosomal Locations for CCDS 54122.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 41054840 41055211 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (372 nt):
ATGACCGGCTCCTGCTGCGGCTCCACCTTCTCCTCCCTGAGCTACGGGGGAGGCTGCTGCCAGCCCTGCT
GCTGCCGCGACCCCTGCTGCTGCCGCCCCGTGACCTGCCAGACCACCGTGTGCCGCCCCGTGACCTGCGT
GCCCCGCTGCACGCGCCCCATCTGCGAGCCCTGCCGCCGCCCGGTGTGCTGCGACCCCTGCTCCCTGCAG
GAAGGCTGCTGCCGCCCCATCACCTGCTGCCCCTCGTCGTGCACGGCTGTGGTGTGCAGGCCCTGCTGCT
GGGCCACCACCTGCTGCCAGCCTGTGTCTGTGCAGTCCCCCTGCGGCCAGCCGACCCCTTGCAGCACCAC
CTGCAGGACCTCCTCCTGCTGA

Translation (123 aa):
MTGSCCGSTFSSLSYGGGCCQPCCCRDPCCCRPVTCQTTVCRPVTCVPRCTRPICEPCRRPVCCDPCSLQ
EGCCRPITCCPSSCTAVVCRPCCWATTCCQPVSVQSPCGQPTPCSTTCRTSSC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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