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Report for CCDS9622.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9622.1 Public Homo sapiens 14 TGM1 24 110 108 CCDS HistoryNCBI Gene:7051Re-query CCDS DB by CCDS ID:9622.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9622.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000206765.11 ENSP00000206765.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000206765.11Link to Ensembl Protein Viewer:ENSP00000206765.6Re-query CCDS DB by Nucleotide ID:ENST00000206765Re-query CCDS DB by Protein ID:ENSP00000206765
Original member Current member NCBI NM_000359.3 NP_000350.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_000359.3Link to Protein Sequence:NP_000350.1Re-query CCDS DB by Nucleotide ID:NM_000359Re-query CCDS DB by Protein ID:NP_000350Link to BLAST:NP_000350.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000350.1 817 P22735-1 817 100% 0 0

Chromosomal Locations for CCDS 9622.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 24249313 24249541 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24254152 24254288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24254664 24254824 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24254972 24255253 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24255364 24255517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24255989 24256077 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24258285 24258388 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24258535 24258673 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24259075 24259249 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24259704 24259811 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24259940 24260058 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24260450 24260698 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24261695 24261883 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24262034 24262352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2454 nt):
ATGATGGATGGGCCACGTTCCGATGTGGGCCGTTGGGGTGGCAACCCCTTGCAGCCCCCTACCACGCCAT
CTCCAGAGCCAGAGCCAGAGCCAGACGGACGCTCTCGCAGAGGAGGAGGCCGTTCCTTCTGGGCTCGCTG
CTGTGGCTGCTGTTCATGCCGAAATGCGGCAGATGACGACTGGGGACCTGAACCCTCTGACTCCAGGGGT
CGAGGGTCCAGCTCTGGCACTCGAAGACCTGGCTCCCGGGGCTCAGACTCCCGCCGGCCTGTATCCCGGG
GCAGCGGTGTCAATGCAGCTGGAGATGGCACCATCCGAGAGGGCATGCTAGTAGTGAACGGTGTGGACTT
GCTGAGCTCGCGCTCGGACCAGAACCGCCGAGAGCACCACACAGACGAGTATGAGTACGACGAGCTGATA
GTGCGCCGCGGGCAGCCTTTCCATATGCTCCTCCTCCTGTCCCGGACCTATGAATCCTCTGATCGCATCA
CCCTTGAGTTACTCATCGGAAACAACCCCGAGGTGGGCAAGGGCACGCACGTGATCATCCCAGTGGGCAA
GGGGGGCAGTGGAGGCTGGAAAGCCCAGGTGGTCAAGGCCAGTGGGCAGAATCTGAACCTGCGGGTCCAC
ACTTCCCCCAACGCCATCATCGGCAAGTTTCAGTTCACAGTCCGCACACAATCAGACGCTGGGGAGTTCC
AGTTGCCCTTTGACCCCCGCAATGAGATCTACATCCTCTTCAACCCCTGGTGCCCAGAGGACATTGTGTA
CGTGGACCATGAGGATTGGCGGCAGGAGTATGTTCTTAATGAGTCTGGGAGAATTTACTACGGGACCGAA
GCACAGATTGGTGAGCGGACCTGGAACTACGGCCAGTTTGACCACGGGGTGCTGGATGCCTGCTTATACA
TCCTGGACCGGCGGGGGATGCCATATGGAGGCCGTGGAGACCCAGTCAATGTCTCCCGGGTCATCTCTGC
CATGGTGAACTCCCTGGATGACAATGGAGTCCTGATTGGGAACTGGTCTGGTGATTACTCCCGAGGCACC
AACCCATCAGCGTGGGTGGGCAGCGTGGAGATCCTGCTTAGCTACCTACGCACGGGATATTCCGTCCCCT
ATGGCCAGTGCTGGGTCTTTGCTGGCGTGACCACCACAGTGCTGCGCTGCCTGGGTCTGGCCACCCGTAC
TGTCACCAACTTCAACTCCGCCCACGACACAGACACATCCCTTACCATGGACATCTACTTCGACGAGAAC
ATGAAGCCCCTGGAGCACCTGAACCATGATTCTGTCTGGAACTTCCATGTGTGGAACGACTGCTGGATGA
AGAGGCCGGATCTGCCCTCGGGCTTTGATGGGTGGCAGGTGGTGGATGCCACACCCCAAGAGACTAGCAG
TGGCATCTTCTGCTGCGGCCCCTGCTCTGTGGAGTCCATCAAGAATGGCCTGGTCTACATGAAGTACGAC
ACGCCTTTCATTTTTGCTGAGGTGAATAGTGACAAGGTGTACTGGCAGCGGCAGGATGATGGCAGCTTCA
AGATTGTTTATGTGGAGGAGAAGGCCATCGGCACACTCATTGTCACAAAGGCCATCAGCTCCAACATGCG
GGAGGACATCACCTACCTCTATAAGCACCCAGAAGGCTCAGACGCAGAGCGGAAGGCAGTAGAGACAGCA
GCAGCCCACGGCAGCAAACCCAATGTGTATGCCAACCGGGGCTCAGCGGAGGATGTGGCCATGCAGGTGG
AGGCACAGGACGCGGTGATGGGGCAGGATCTGATGGTCTCTGTGATGCTGATCAATCACAGCAGCAGCCG
CCGCACAGTGAAACTGCACCTCTACCTCTCAGTCACTTTCTATACTGGTGTCAGTGGTACCATCTTCAAG
GAGACCAAGAAGGAAGTGGAGCTGGCACCAGGGGCCTCGGACCGTGTGACCATGCCAGTGGCCTACAAGG
AATACCGGCCCCATCTTGTGGACCAGGGGGCCATGCTGCTCAATGTCTCAGGCCACGTCAAGGAGAGCGG
GCAGGTGCTGGCCAAGCAGCACACCTTCCGTCTGCGCACCCCAGACCTCTCCCTCACGTTACTGGGAGCA
GCAGTGGTTGGCCAGGAGTGTGAAGTACAGATTGTCTTCAAGAACCCCCTTCCCGTCACCCTCACCAATG
TCGTCTTCCGGCTCGAAGGCTCTGGGTTACAGAGGCCCAAGATCCTCAACGTTGGGGACATTGGAGGCAA
TGAAACAGTGACACTGCGCCAGTCGTTTGTGCCTGTGCGACCAGGCCCCCGCCAGCTCATTGCCAGCTTG
GACAGCCCACAGCTCTCCCAGGTGCACGGTGTCATCCAGGTGGATGTGGCCCCAGCCCCTGGGGATGGGG
GCTTCTTCTCAGACGCTGGAGGTGACAGTCACTTAGGAGAGACCATCCCTATGGCATCTCGAGGTGGAGC
TTAG

Translation (817 aa):
MMDGPRSDVGRWGGNPLQPPTTPSPEPEPEPDGRSRRGGGRSFWARCCGCCSCRNAADDDWGPEPSDSRG
RGSSSGTRRPGSRGSDSRRPVSRGSGVNAAGDGTIREGMLVVNGVDLLSSRSDQNRREHHTDEYEYDELI
VRRGQPFHMLLLLSRTYESSDRITLELLIGNNPEVGKGTHVIIPVGKGGSGGWKAQVVKASGQNLNLRVH
TSPNAIIGKFQFTVRTQSDAGEFQLPFDPRNEIYILFNPWCPEDIVYVDHEDWRQEYVLNESGRIYYGTE
AQIGERTWNYGQFDHGVLDACLYILDRRGMPYGGRGDPVNVSRVISAMVNSLDDNGVLIGNWSGDYSRGT
NPSAWVGSVEILLSYLRTGYSVPYGQCWVFAGVTTTVLRCLGLATRTVTNFNSAHDTDTSLTMDIYFDEN
MKPLEHLNHDSVWNFHVWNDCWMKRPDLPSGFDGWQVVDATPQETSSGIFCCGPCSVESIKNGLVYMKYD
TPFIFAEVNSDKVYWQRQDDGSFKIVYVEEKAIGTLIVTKAISSNMREDITYLYKHPEGSDAERKAVETA
AAHGSKPNVYANRGSAEDVAMQVEAQDAVMGQDLMVSVMLINHSSSRRTVKLHLYLSVTFYTGVSGTIFK
ETKKEVELAPGASDRVTMPVAYKEYRPHLVDQGAMLLNVSGHVKESGQVLAKQHTFRLRTPDLSLTLLGA
AVVGQECEVQIVFKNPLPVTLTNVVFRLEGSGLQRPKILNVGDIGGNETVTLRQSFVPVRPGPRQLIASL
DSPQLSQVHGVIQVDVAPAPGDGGFFSDAGGDSHLGETIPMASRGGA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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