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Report for CCDS14302.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14302.1 Public Homo sapiens X WDR13 24 110 108 CCDS HistoryNCBI Gene:64743Re-query CCDS DB by CCDS ID:14302.1See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14302.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000218056.9 ENSP00000218056.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000218056.9Link to Ensembl Protein Viewer:ENSP00000218056.5Re-query CCDS DB by Nucleotide ID:ENST00000218056Re-query CCDS DB by Protein ID:ENSP00000218056
Original member Current member EBI ENST00000376729.10 ENSP00000365919.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000376729.10Link to Ensembl Protein Viewer:ENSP00000365919.5Re-query CCDS DB by Nucleotide ID:ENST00000376729Re-query CCDS DB by Protein ID:ENSP00000365919
Original member Current member NCBI NM_001347217.2 NP_001334146.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001347217.2Link to Protein Sequence:NP_001334146.1Re-query CCDS DB by Nucleotide ID:NM_001347217Re-query CCDS DB by Protein ID:NP_001334146Link to BLAST:NP_001334146.1
Original member Current member NCBI NM_017883.6 NP_060353.2 Accepted alive Link to Nucleotide Sequence:NM_017883.6Link to Protein Sequence:NP_060353.2Re-query CCDS DB by Nucleotide ID:NM_017883Re-query CCDS DB by Protein ID:NP_060353Link to BLAST:NP_060353.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001334146.1 485 Q9H1Z4-1 485 100% 0 0
NP_060353.2 485 Q9H1Z4-1 485 100% 0 0

Chromosomal Locations for CCDS 14302.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 48597997 48598037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48598717 48598957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48599353 48599462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48599587 48599717 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48600319 48600626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48601784 48601964 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48602065 48602206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48604272 48604390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48604848 48605032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1458 nt):
ATGGCCGCGGTGTGGCAGCAAGTCTTAGCAGTGGACGCGAGGTACAACGCGTACCGCACACCAACGTTTC
CACAGTTTCGGACGCAGTATATCCGCCGGCGCAGCCAGCTGCTGCGGGAGAATGCCAAGGCTGGGCACCC
CCCAGCGCTGCGTCGGCAGTACCTGAGGCTTCGGGGGCAGCTGCTGGGCCAGCGCTACGGGCCCCTCTCC
GAGCCAGGCAGTGCTCGTGCCTATAGCAACAGCATCGTCCGCAGTAGCCGCACTACTCTTGACCGCATGG
AGGACTTTGAGGATGATCCTCGGGCCCTGGGGGCCCGTGGGCACCGTCGTTCTGTCAGCAGAGGCTCCTA
CCAGCTGCAGGCGCAGATGAACCGTGCCGTCTATGAGGACAGGCCCCCTGGCAGCGTGGTGCCCACGTCA
GCAGCAGAGGCAAGTCGGGCCATGGCCGGGGACACGTCACTGAGCGAGAACTATGCCTTTGCGGGCATGT
ATCATGTTTTTGACCAGCACGTGGATGAGGCAGTCCCAAGGGTGCGCTTCGCCAATGATGACCGACACCG
CCTGGCCTGCTGCTCACTCGACGGCAGCATCTCCCTGTGCCAGCTGGTGCCTGCCCCACCCACAGTGCTT
CGCGTGCTACGGGGCCACACCCGTGGTGTCTCCGACTTCGCCTGGTCCCTCTCCAATGACATCCTCGTGT
CCACCTCACTGGATGCCACCATGCGCATCTGGGCCTCTGAGGATGGTCGCTGCATCCGAGAGATCCCTGA
CCCCGATAGCGCTGAACTGCTCTGCTGCACCTTCCAGCCTGTCAACAACAACCTCACTGTGGTGGGGAAC
GCCAAGCACAACGTGCATGTCATGAACATCTCCACAGGCAAGAAAGTGAAGGGGGGCTCCAGCAAGCTGA
CAGGCCGTGTCCTTGCTCTGTCCTTTGATGCCCCTGGCCGGCTGCTCTGGGCGGGTGATGACCGTGGCAG
TGTCTTCTCTTTCCTCTTTGATATGGCCACAGGGAAGCTGACCAAAGCCAAGCGTTTGGTGGTGCATGAG
GGGAGCCCTGTGACCAGCATCTCAGCCCGGTCCTGGGTCAGCCGCGAGGCCCGGGATCCCTCACTGCTCA
TCAATGCTTGCCTCAACAAGTTGCTGCTCTACAGGGTGGTAGACAACGAGGGGACCCTGCAGCTGAAGAG
AAGCTTCCCCATCGAGCAGAGCTCACATCCTGTGCGCAGCATCTTCTGTCCCCTCATGTCCTTCCGCCAG
GGGGCCTGCGTGGTGACGGGCAGTGAGGACATGTGCGTGCACTTCTTTGATGTGGAGCGGGCGGCCAAGG
CTGCTGTCAACAAGCTGCAGGGCCACAGTGCACCTGTGCTTGATGTCAGCTTCAACTGCGACGAGAGCCT
ACTGGCCTCCAGTGACGCCAGCGGCATGGTCATCGTCTGGAGGCGGGAGCAGAAGTAG

Translation (485 aa):
MAAVWQQVLAVDARYNAYRTPTFPQFRTQYIRRRSQLLRENAKAGHPPALRRQYLRLRGQLLGQRYGPLS
EPGSARAYSNSIVRSSRTTLDRMEDFEDDPRALGARGHRRSVSRGSYQLQAQMNRAVYEDRPPGSVVPTS
AAEASRAMAGDTSLSENYAFAGMYHVFDQHVDEAVPRVRFANDDRHRLACCSLDGSISLCQLVPAPPTVL
RVLRGHTRGVSDFAWSLSNDILVSTSLDATMRIWASEDGRCIREIPDPDSAELLCCTFQPVNNNLTVVGN
AKHNVHVMNISTGKKVKGGSSKLTGRVLALSFDAPGRLLWAGDDRGSVFSFLFDMATGKLTKAKRLVVHE
GSPVTSISARSWVSREARDPSLLINACLNKLLLYRVVDNEGTLQLKRSFPIEQSSHPVRSIFCPLMSFRQ
GACVVTGSEDMCVHFFDVERAAKAAVNKLQGHSAPVLDVSFNCDESLLASSDASGMVIVWRREQK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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