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Report for CCDS13571.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13571.1 Public Homo sapiens 21 TMPRSS15 24 110 108 CCDS HistoryNCBI Gene:5651Re-query CCDS DB by CCDS ID:13571.1See the combined annotation on chromosome 21 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13571.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000284885.8 ENSP00000284885.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000284885.8Link to Ensembl Protein Viewer:ENSP00000284885.3Re-query CCDS DB by Nucleotide ID:ENST00000284885Re-query CCDS DB by Protein ID:ENSP00000284885
Original member Current member NCBI NM_002772.3 NP_002763.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002772.3Link to Protein Sequence:NP_002763.3Re-query CCDS DB by Nucleotide ID:NM_002772Re-query CCDS DB by Protein ID:NP_002763Link to BLAST:NP_002763.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002763.3 1019 P98073 1019 100% 0 0

Chromosomal Locations for CCDS 13571.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 21 (NC_000021.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21See the combined annotation on chromosome 21 in Sequence Viewer

Chromosome Start Stop Links
21 18269969 18270124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 18275197 18275336 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 18278964 18279059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 18281040 18281221 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 18294270 18294444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 18294603 18294652 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 18297734 18297829 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 18312945 18313077 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 18315146 18315256 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 18326432 18326572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 18329169 18329294 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 18332084 18332173 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 18341413 18341548 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 18343506 18343656 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 18343955 18344060 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 18352903 18353052 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 18353723 18353863 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 18359757 18359863 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 18365140 18365248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 18372193 18372324 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 18379283 18379318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 18383627 18383778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 18397879 18397946 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 18398199 18398329 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 18403478 18403622 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3060 nt):
ATGGGGTCGAAAAGAGGCATATCTTCTAGGCATCATTCTCTCAGCTCCTATGAAATCATGTTTGCAGCTC
TCTTTGCCATATTGGTAGTGCTCTGTGCTGGATTAATTGCAGTATCCTGCCTGACAATCAAGGAATCCCA
ACGAGGTGCAGCACTTGGACAGAGTCATGAAGCCAGAGCGACATTTAAAATAACATCCGGAGTTACATAT
AATCCTAATTTGCAAGACAAACTCTCAGTGGATTTCAAAGTTCTTGCTTTTGACCTTCAGCAAATGATAG
ATGAGATCTTTCTATCAAGCAATCTGAAGAATGAATATAAGAACTCAAGAGTTTTACAATTTGAAAATGG
CAGCATTATAGTCGTATTTGACCTTTTCTTTGCCCAGTGGGTGTCAGATGAAAATGTAAAAGAAGAACTG
ATTCAAGGCCTTGAAGCAAATAAATCCAGCCAACTGGTCACTTTCCATATTGATTTGAACAGCGTTGATA
TCCTAGACAAGCTAACAACCACCAGTCATCTGGCAACTCCAGGAAATGTCTCAATAGAGTGCCTGCCTGG
TTCAAGTCCTTGTACTGATGCTCTAACGTGTATAAAAGCTGATTTATTTTGTGATGGAGAAGTAAACTGT
CCAGATGGTTCTGACGAAGACAATAAAATGTGTGCCACAGTTTGTGATGGAAGATTTTTGTTAACTGGAT
CATCTGGGTCTTTCCAGGCTACTCATTATCCAAAACCTTCTGAAACAAGTGTTGTCTGCCAGTGGATCAT
ACGTGTAAACCAAGGACTTTCCATTAAACTGAGCTTCGATGATTTTAATACATATTATACAGATATATTA
GATATTTATGAAGGTGTAGGATCAAGCAAGATTTTAAGAGCTTCTATTTGGGAAACTAATCCTGGCACAA
TAAGAATTTTTTCCAACCAAGTTACTGCCACCTTTCTTATAGAATCTGATGAAAGTGATTATGTTGGCTT
TAATGCAACATATACTGCATTTAACAGCAGTGAGCTTAATAATTATGAGAAAATTAATTGTAACTTTGAG
GATGGCTTTTGTTTCTGGGTCCAGGATCTAAATGATGATAATGAATGGGAAAGGATTCAGGGAAGCACCT
TTTCTCCTTTTACTGGACCCAATTTTGACCACACTTTTGGCAATGCTTCAGGATTTTACATTTCTACCCC
AACTGGACCAGGAGGGAGACAAGAACGAGTGGGGCTTTTAAGCCTCCCTTTGGACCCCACTTTGGAGCCA
GCTTGCCTTAGTTTCTGGTATCATATGTATGGTGAAAATGTCCATAAATTAAGCATTAATATCAGCAATG
ACCAAAATATGGAGAAGACAGTTTTCCAAAAGGAAGGAAATTATGGAGACAATTGGAATTATGGACAAGT
AACCCTAAATGAAACAGTTAAATTTAAGGTTGCTTTTAATGCTTTTAAAAACAAGATCCTGAGTGATATT
GCGTTGGATGACATTAGCCTAACATATGGGATTTGCAATGGGAGTCTTTATCCAGAACCAACTTTGGTGC
CAACTCCTCCACCAGAACTTCCTACGGACTGTGGAGGACCTTTTGAGCTGTGGGAGCCAAATACAACATT
CAGTTCTACGAACTTTCCAAACAGCTACCCTAATCTGGCTTTCTGTGTTTGGATTTTAAATGCACAAAAA
GGAAAGAATATACAACTTCATTTTCAAGAATTTGACTTAGAAAATATTAACGATGTAGTTGAAATAAGAG
ATGGTGAAGAAGCTGATTCCTTGCTCTTAGCTGTGTACACAGGGCCTGGCCCAGTAAAGGATGTGTTCTC
TACCACCAACAGAATGACTGTGCTTCTCATCACTAACGATGTGTTGGCAAGAGGAGGGTTTAAAGCAAAC
TTTACTACTGGCTATCACTTGGGGATTCCAGAGCCATGCAAGGCAGACCATTTTCAATGTAAAAATGGAG
AGTGTGTTCCACTGGTGAATCTCTGTGACGGTCATCTGCACTGTGAGGATGGCTCAGATGAAGCAGATTG
TGTGCGTTTTTTCAATGGCACAACGAACAACAATGGTTTAGTGCGGTTCAGAATCCAGAGCATATGGCAT
ACAGCTTGTGCTGAGAACTGGACCACCCAGATTTCAAATGATGTTTGTCAACTGCTGGGACTAGGGAGTG
GAAACTCATCAAAGCCAATCTTCCCTACCGATGGTGGACCATTTGTCAAATTAAACACAGCACCTGATGG
CCACTTAATACTAACACCCAGTCAACAGTGTTTACAGGATTCCTTGATTCGGTTACAGTGTAACCATAAA
TCTTGTGGAAAAAAACTGGCAGCTCAAGACATCACCCCAAAGATTGTTGGAGGAAGTAATGCCAAAGAAG
GGGCCTGGCCCTGGGTTGTGGGTCTGTATTATGGCGGCCGACTGCTCTGCGGCGCATCTCTCGTCAGCAG
TGACTGGCTGGTGTCCGCCGCACACTGCGTGTATGGGAGAAACTTAGAGCCATCCAAGTGGACAGCAATC
CTAGGCCTGCATATGAAATCAAATCTGACCTCTCCTCAAACAGTCCCTCGATTAATAGATGAAATTGTCA
TAAACCCTCATTACAATAGGCGAAGAAAGGACAACGACATTGCCATGATGCATCTGGAATTTAAAGTGAA
TTACACAGATTACATACAACCTATTTGTTTACCGGAAGAAAATCAAGTTTTTCCTCCAGGAAGAAATTGT
TCTATTGCTGGTTGGGGGACGGTTGTATATCAAGGTACTACTGCAAACATATTGCAAGAAGCTGATGTTC
CTCTTCTATCAAATGAGAGATGCCAACAGCAGATGCCAGAATATAACATTACTGAAAATATGATATGTGC
AGGCTATGAAGAAGGAGGAATAGATTCTTGTCAGGGGGATTCAGGAGGACCATTAATGTGCCAAGAAAAC
AACAGGTGGTTCCTTGCTGGTGTGACCTCATTTGGATACAAGTGTGCCCTGCCTAATCGCCCCGGAGTGT
ATGCCAGGGTCTCAAGGTTTACCGAATGGATACAAAGTTTTCTACATTAG

Translation (1019 aa):
MGSKRGISSRHHSLSSYEIMFAALFAILVVLCAGLIAVSCLTIKESQRGAALGQSHEARATFKITSGVTY
NPNLQDKLSVDFKVLAFDLQQMIDEIFLSSNLKNEYKNSRVLQFENGSIIVVFDLFFAQWVSDENVKEEL
IQGLEANKSSQLVTFHIDLNSVDILDKLTTTSHLATPGNVSIECLPGSSPCTDALTCIKADLFCDGEVNC
PDGSDEDNKMCATVCDGRFLLTGSSGSFQATHYPKPSETSVVCQWIIRVNQGLSIKLSFDDFNTYYTDIL
DIYEGVGSSKILRASIWETNPGTIRIFSNQVTATFLIESDESDYVGFNATYTAFNSSELNNYEKINCNFE
DGFCFWVQDLNDDNEWERIQGSTFSPFTGPNFDHTFGNASGFYISTPTGPGGRQERVGLLSLPLDPTLEP
ACLSFWYHMYGENVHKLSINISNDQNMEKTVFQKEGNYGDNWNYGQVTLNETVKFKVAFNAFKNKILSDI
ALDDISLTYGICNGSLYPEPTLVPTPPPELPTDCGGPFELWEPNTTFSSTNFPNSYPNLAFCVWILNAQK
GKNIQLHFQEFDLENINDVVEIRDGEEADSLLLAVYTGPGPVKDVFSTTNRMTVLLITNDVLARGGFKAN
FTTGYHLGIPEPCKADHFQCKNGECVPLVNLCDGHLHCEDGSDEADCVRFFNGTTNNNGLVRFRIQSIWH
TACAENWTTQISNDVCQLLGLGSGNSSKPIFPTDGGPFVKLNTAPDGHLILTPSQQCLQDSLIRLQCNHK
SCGKKLAAQDITPKIVGGSNAKEGAWPWVVGLYYGGRLLCGASLVSSDWLVSAAHCVYGRNLEPSKWTAI
LGLHMKSNLTSPQTVPRLIDEIVINPHYNRRRKDNDIAMMHLEFKVNYTDYIQPICLPEENQVFPPGRNC
SIAGWGTVVYQGTTANILQEADVPLLSNERCQQQMPEYNITENMICAGYEEGGIDSCQGDSGGPLMCQEN
NRWFLAGVTSFGYKCALPNRPGVYARVSRFTEWIQSFLH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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