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Report for CCDS2519.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2519.1 Public Homo sapiens 2 PRLH 24 110 108 CCDS HistoryNCBI Gene:51052Re-query CCDS DB by CCDS ID:2519.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2519.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000165524.1 ENSP00000165524.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000165524.1Link to Ensembl Protein Viewer:ENSP00000165524.1Re-query CCDS DB by Nucleotide ID:ENST00000165524Re-query CCDS DB by Protein ID:ENSP00000165524
Original member Current member NCBI NM_015893.1 NP_056977.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015893.1Link to Protein Sequence:NP_056977.1Re-query CCDS DB by Nucleotide ID:NM_015893Re-query CCDS DB by Protein ID:NP_056977Link to BLAST:NP_056977.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056977.1 87 P81277 87 100% 0 0

Chromosomal Locations for CCDS 2519.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 237566574 237566673 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 237567012 237567175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (264 nt):
ATGAAGGTGCTGAGGGCCTGGCTCCTGTGCCTGCTGATGCTGGGCCTGGCCCTGCGGGGAGCTGCAAGTC
GTACCCATCGGCACTCCATGGAGATCCGCACCCCTGACATCAATCCTGCCTGGTACGCCAGTCGCGGGAT
CAGGCCTGTGGGCCGCTTCGGTCGGAGGAGGGCAACCCTGGGGGACGTCCCCAAGCCTGGCCTGCGACCC
CGGCTGACCTGCTTCCCCCTGGAAGGCGGTGCTATGTCGTCCCAGGATGGCTGA

Translation (87 aa):
MKVLRAWLLCLLMLGLALRGAASRTHRHSMEIRTPDINPAWYASRGIRPVGRFGRRRATLGDVPKPGLRP
RLTCFPLEGGAMSSQDG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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