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Report for CCDS14465.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14465.1 Public Homo sapiens X NAP1L3 24 110 108 CCDS HistoryNCBI Gene:4675Re-query CCDS DB by CCDS ID:14465.1See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14465.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000373079.4 ENSP00000362171.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000373079.4Link to Ensembl Protein Viewer:ENSP00000362171.3Re-query CCDS DB by Nucleotide ID:ENST00000373079Re-query CCDS DB by Protein ID:ENSP00000362171
Original member Current member NCBI NM_004538.6 NP_004529.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004538.6Link to Protein Sequence:NP_004529.2Re-query CCDS DB by Nucleotide ID:NM_004538Re-query CCDS DB by Protein ID:NP_004529Link to BLAST:NP_004529.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004529.2 506 Q99457 506 100% 0 0

Chromosomal Locations for CCDS 14465.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 93671784 93673304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1521 nt):
ATGGCAGAAGCAGATTTTAAAATGGTCTCGGAACCTGTCGCCCATGGGGTTGCCGAAGAGGAGATGGCTA
GCTCGACTAGTGATTCTGGGGAAGAATCTGACAGCAGTAGCTCTAGCAGCAGCACTAGTGACAGCAGCAG
CAGCAGCAGCACTAGTGGCAGCAGCAGCGGCAGCGGCAGCAGCAGCAGCAGCAGCGGCAGCACTAGCAGC
CGCAGCCGCTTGTATAGAAAGAAGAGGGTACCTGAGCCTTCCAGAAGGGCGCGGCGGGCCCCGTTGGGAA
CAAATTTCGTGGATAGGCTGCCTCAGGCAGTTAGAAATCGTGTGCAAGCGCTTAGAAACATTCAAGATGA
ATGTGACAAGGTAGATACCCTGTTCTTAAAAGCAATTCATGATCTTGAAAGAAAATATGCTGAACTCAAC
AAGCCTCTGTATGATAGGCGGTTTCAAATCATCAATGCAGAATACGAGCCTACAGAAGAAGAATGTGAAT
GGAATTCAGAGGATGAGGAGTTCAGCAGTGATGAGGAGGTGCAGGATAACACCCCTAGTGAAATGCCTCC
CTTAGAGGGTGAGGAAGAAGAAAACCCTAAAGAAAACCCAGAGGTGAAAGCTGAAGAGAAGGAAGTTCCT
AAAGAAATTCCTGAGGTGAAGGATGAAGAAAAGGAAGTTCCTAAAGAAATTCCTGAGGTAAAGGCTGAAG
AAAAAGCAGATTCTAAAGACTGTATGGAGGCAACCCCTGAAGTAAAAGAAGATCCTAAAGAAGTCCCCCA
GGTAAAGGCAGATGATAAAGAACAGCCTAAAGCAACAGAGGCTAAGGCAAGGGCTGCAGTAAGAGAGACT
CATAAAAGAGTTCCTGAGGAAAGGCTTCAGGACAGTGTAGATCTTAAAAGAGCTAGGAAGGGAAAGCCTA
AAAGAGAAGACCCTAAAGGCATTCCTGACTATTGGCTGATTGTTTTAAAGAATGTTGACAAGCTCGGGCC
TATGATTCAGAAGTATGATGAGCCCATTCTGAAGTTCTTGTCGGATGTTAGCCTGAAGTTCTCAAAACCT
GGCCAGCCTGTAAGTTACACCTTTGAATTTCATTTTCTACCCAACCCATACTTCAGAAATGAGGTGCTGG
TGAAGACATATATAATAAAGGCAAAACCAGATCACAATGATCCCTTCTTTTCTTGGGGATGGGAAATTGA
AGATTGCAAAGGCTGCAAGATAGACTGGAGAAGAGGAAAAGATGTTACTGTGACAACTACCCAGAGTCGC
ACAACTGCTACTGGAGAAATTGAAATCCAGCCAAGAGTGGTTCCTAATGCATCATTCTTCAACTTCTTTA
GTCCTCCTGAGATTCCTATGATTGGGAAGCTGGAACCACGAGAAGATGCTATCCTGGATGAGGACTTTGA
AATTGGGCAGATTTTACATGATAATGTCATCCTGAAATCAATCTATTACTATACTGGAGAAGTCAATGGT
ACCTACTATCAATTTGGCAAACATTATGGAAACAAGAAATACAGAAAATAA

Translation (506 aa):
MAEADFKMVSEPVAHGVAEEEMASSTSDSGEESDSSSSSSSTSDSSSSSSTSGSSSGSGSSSSSSGSTSS
RSRLYRKKRVPEPSRRARRAPLGTNFVDRLPQAVRNRVQALRNIQDECDKVDTLFLKAIHDLERKYAELN
KPLYDRRFQIINAEYEPTEEECEWNSEDEEFSSDEEVQDNTPSEMPPLEGEEEENPKENPEVKAEEKEVP
KEIPEVKDEEKEVPKEIPEVKAEEKADSKDCMEATPEVKEDPKEVPQVKADDKEQPKATEAKARAAVRET
HKRVPEERLQDSVDLKRARKGKPKREDPKGIPDYWLIVLKNVDKLGPMIQKYDEPILKFLSDVSLKFSKP
GQPVSYTFEFHFLPNPYFRNEVLVKTYIIKAKPDHNDPFFSWGWEIEDCKGCKIDWRRGKDVTVTTTQSR
TTATGEIEIQPRVVPNASFFNFFSPPEIPMIGKLEPREDAILDEDFEIGQILHDNVILKSIYYYTGEVNG
TYYQFGKHYGNKKYRK


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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