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Report for CCDS44363.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44363.1 Public Homo sapiens 10 SKIDA1 24 110 108 CCDS HistoryNCBI Gene:387640Re-query CCDS DB by CCDS ID:44363.1See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44363.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000449193.7 ENSP00000410041.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000449193.7Link to Ensembl Protein Viewer:ENSP00000410041.2Re-query CCDS DB by Nucleotide ID:ENST00000449193Re-query CCDS DB by Protein ID:ENSP00000410041
Original member Current member NCBI NM_207371.4 NP_997254.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_207371.4Link to Protein Sequence:NP_997254.3Re-query CCDS DB by Nucleotide ID:NM_207371Re-query CCDS DB by Protein ID:NP_997254Link to BLAST:NP_997254.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_997254.3 908 Q1XH10-1 908 100% 0 0

Chromosomal Locations for CCDS 44363.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 21515096 21517822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2727 nt):
ATGGGAGACCTGAAGTCAGGTTTTGAAGAGGTGGATGGCGTGAGGCTCGGCTACCTCATCATTAAAGGGA
AGCAAATGTTTGCCCTCTCCCAAGTCTTCACAGATCTGCTGAAAAACATCCCGAGGACGACCGTGCACAA
GCGCATGGATCATCTGAAAGTGAAGAAGCACCACTGCGATCTGGAGGAGTTGCGGAAACTCAAGGCAATT
AACAGCATCGCCTTCCACGCCGCCAAATGCACGCTCATCTCCCGGGAAGACGTGGAAGCGCTCTACACCT
CCTGCAAAACCGAGCGCGTCCTCAAGACCAAGCGCAGGCGGGTCGGCCGGGCCCTGGCCACAAAGGCGCC
GCCGCCAGAGCGCGCCGCTGCCGCCAGCCCCCGCCCGGGATTTTGGAAGGACAAGCACCAACTTTGGCGG
GGCCTGAGCGGAGCCGCGCGGCCCCTGCCAATCAGCGCGCAGTCCCAGCGCCCGGGCGCCGCCGCCGCGC
GCCCCGCCGCCCATCTACCTCAGATTTTTAGCAAATACCCCGGCTCGCACTACCCGGAGATCGTGCGCTC
GCCGTGCAAACCCCCTCTAAACTATGAAACTGCCCCGCTCCAGGGAAACTACGTCGCCTTCCCCTCGGAC
CCTGCTTATTTTCGGAGCCTGCTGTGCAGCAAACACCCGGCAGCCGCCGCCGCCGCCGCCGCCGCCGCTG
CTGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCTATTACCAGGTATCGGCGGCCGGGCCCCAGCCCAAGGC
AGCGGCGGGCGCCGGAGGCCCGGGGAGCCTGAGCTACCGCTGCAAGCGCAAGCGCGGCGGCGCCAAGGAC
TGCCTGCTCGCGCCTCACGCCGGCGCGCGGCGCCTGCTGCTGTTGCCCAGGTCCTACAAAGCCAAGGCGG
CGGCGGCGGCGGCGGCGGCGGCAGCGGCGGCGGCGGCCGCCGCGGGGGCCACTTGCCTGGAGAGGTTTCA
TCTGGTCAACGGCTTCTGCCCGCCTCCGCACCACCACCACCACCACCACCATCACCACCACCACCACCAC
CACCGGGCCCAGCCGCCGCAGCAGAGTCACCACCCCCCTCACCACCACCGGCCGCAGCCCCATCTGGGCA
GCTTTCCCGAGAGCTGCAGCAGCGACTCCGAGTCCAGCTCCTACTCGGACCACGCGGCCAACGACTCGGA
TTTTGGCTCCAGTTTGTCCAGCTCCAGCAATTCTGTGTCCTCAGAGGAAGAGGAGGAGGAGGGAGAGGAG
GAGGAGGAGGAAGAGGAGGAGGAGGGGGGCAGCGGGGCCTCGGATTCCAGTGAAGTCAGCTCGGAGGAGG
AGGACTCGTCCACCGAGTCGGACTCCAGCTCCGGCTCCAGCCAAGTGTCAGTGCAGAGCATCCGATTCAG
GCGCACCAGCTTCTGCAAGCCTCCCAGCGTGCAGGCGCAGGCCAACTTCTTGTACCATCTGGCCTCCGCC
GCCGCTGCAACCAAACCCGCTGCTTTCGAGGATGCCGGCAGACTTCCCGACCTCAAGAGTAGTGTCAAAG
CGGAGTCGCCGGCGGAGTGGAATCTGCAGAGCTGGGCCCCCAAAGCATCTCCGGTGTACTGCCCGGCCAG
CCTGGGGAGTTGTTTCGCTGAGATAAGGAACGATAGGGTATCTGAGATTACATTCCCACACTCTGAAATT
TCCAATGCTGTAAAGAGAACTGACCTGACAATTAACTGCCTGGCAGAGGGGGCCTCTTCACCTAGCCCAA
AGACAAACAATGCATTTCCACAACAAAGAATACTCCGAGAGGCTAGGAAATGCCTACAAACAACTCCTAC
TACACACTGTGCAGATAACAACACAATAGCTGCTAGGTTCTTAAATAATGATTCTTCAGGAGCAGAAGCA
AATTCAGAAAAATATTCCAAAATCCTTCATTGTCCTGAATTTGCTACGGATTTGCCCTCTTCGCAGACTG
ATCCTGAAGTGAACGCTGCAGGAGCAGCAGCAACTAAAGCCGAGAATCCCTGCACTGACACAGGCGACAA
GACATTGCCATTTCTGCACAATATTAAAATCAAAGTAGAAGACAGTAGTGCTAATGAAGAATATGAACCT
CACCTTTTTACAAATAAGCTAAAGTGCGAGTGCAATGATACAAAGGGTGAGTTTTACAGTGTGACTGAGA
GTAAAGAGGAGGACGCCTTGTTAACCACAGCCAAGGAAGGTTTTGCATGCCCTGAAAAAGAAACTCCTTC
CTTAAATCCACTGGCTCAAAGTCAGGGCCTTTCATGCACTTTAGGTTCTCCAAAACCTGAGGATGGGGAA
TATAAATTTGGTGCCAGGGTGAGAAAAAATTACCGGACACTAGTACTGGGAAAGCGACCTGTCCTTCAGA
CACCTCCAGTCAAACCAAATTTGAAATCAGCTAGAAGCCCTCGTCCTACAGGTAAAACTGAGACAAATGA
AGGAACACTGGATGATTTTACAGTTATAAACAGACGCAAAAAGGTAGCCAGCAATGTAGCATCAGCAGTG
AAAAGGCCATTTCATTTCATGGCAAATTTTCCTTGTCCACCATCACTCATTATTGGGAGAGATGGGGATT
TGTGGCCGGCGTATTCCTTAAACACCACTAAGGATTCTCAAACTCCTCACAAGGCCCATCCTATATGGAA
ATGGCAGCTGGGCGGTTCTGCAATACCTCTTCCACCTAGTCACAAATTCAGGAAATTTAATTCATAA

Translation (908 aa):
MGDLKSGFEEVDGVRLGYLIIKGKQMFALSQVFTDLLKNIPRTTVHKRMDHLKVKKHHCDLEELRKLKAI
NSIAFHAAKCTLISREDVEALYTSCKTERVLKTKRRRVGRALATKAPPPERAAAASPRPGFWKDKHQLWR
GLSGAARPLPISAQSQRPGAAAARPAAHLPQIFSKYPGSHYPEIVRSPCKPPLNYETAPLQGNYVAFPSD
PAYFRSLLCSKHPAAAAAAAAAAAAAAAAAAAAAYYQVSAAGPQPKAAAGAGGPGSLSYRCKRKRGGAKD
CLLAPHAGARRLLLLPRSYKAKAAAAAAAAAAAAAAAAGATCLERFHLVNGFCPPPHHHHHHHHHHHHHH
HRAQPPQQSHHPPHHHRPQPHLGSFPESCSSDSESSSYSDHAANDSDFGSSLSSSSNSVSSEEEEEEGEE
EEEEEEEEGGSGASDSSEVSSEEEDSSTESDSSSGSSQVSVQSIRFRRTSFCKPPSVQAQANFLYHLASA
AAATKPAAFEDAGRLPDLKSSVKAESPAEWNLQSWAPKASPVYCPASLGSCFAEIRNDRVSEITFPHSEI
SNAVKRTDLTINCLAEGASSPSPKTNNAFPQQRILREARKCLQTTPTTHCADNNTIAARFLNNDSSGAEA
NSEKYSKILHCPEFATDLPSSQTDPEVNAAGAAATKAENPCTDTGDKTLPFLHNIKIKVEDSSANEEYEP
HLFTNKLKCECNDTKGEFYSVTESKEEDALLTTAKEGFACPEKETPSLNPLAQSQGLSCTLGSPKPEDGE
YKFGARVRKNYRTLVLGKRPVLQTPPVKPNLKSARSPRPTGKTETNEGTLDDFTVINRRKKVASNVASAV
KRPFHFMANFPCPPSLIIGRDGDLWPAYSLNTTKDSQTPHKAHPIWKWQLGGSAIPLPPSHKFRKFNS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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