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Report for CCDS2843.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2843.1 Public Homo sapiens 3 ABHD14A 24 110 108 CCDS HistoryNCBI Gene:25864Re-query CCDS DB by CCDS ID:2843.1See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2843.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000273596.8 ENSP00000273596.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000273596.8Link to Ensembl Protein Viewer:ENSP00000273596.3Re-query CCDS DB by Nucleotide ID:ENST00000273596Re-query CCDS DB by Protein ID:ENSP00000273596
Original member Current member NCBI NM_015407.5 NP_056222.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015407.5Link to Protein Sequence:NP_056222.2Re-query CCDS DB by Nucleotide ID:NM_015407Re-query CCDS DB by Protein ID:NP_056222Link to BLAST:NP_056222.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056222.2 271 Q9BUJ0 271 100% 0 0

Chromosomal Locations for CCDS 2843.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 51975136 51975204 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 51977871 51978082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 51978259 51978374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 51980393 51980628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 51980836 51981018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (816 nt):
ATGGTCGGGGCGCTGTGCGGCTGCTGGTTCCGCCTGGGCGGGGCCCGCCCGCTCATCCCGTTGGGCCCGA
CTGTGGTACAGACCTCCATGAGCCGGTCCCAGGTAGCCCTGCTGGGCCTGAGTCTGCTGCTCATGCTCCT
ACTGTATGTGGGGCTGCCAGGCCCCCCTGAGCAGACTTCCTGCCTCTGGGGAGACCCCAATGTCACAGTC
CTGGCTGGTCTCACCCCTGGCAACTCGCCCATCTTTTACCGCGAGGTGCTCCCACTCAACCAGGCACACA
GGGTGGAGGTGGTGCTGCTTCATGGAAAGGCCTTTAACTCTCACACGTGGGAGCAGCTGGGCACACTGCA
GCTACTGTCACAGAGGGGCTACCGGGCCGTGGCCCTTGACCTTCCAGGTTTTGGGAACTCGGCACCTTCA
AAGGAGGCAAGCACAGAGGCAGGGCGGGCAGCGCTGCTGGAGCGGGCGCTGCGGGACCTGGAGGTACAGA
ATGCCGTGTTGGTGAGCCCCTCGCTGAGTGGCCACTATGCCCTGCCCTTCCTGATGCGAGGCCACCACCA
GCTACATGGATTTGTGCCCATCGCACCCACCTCCACCCAGAACTACACCCAGGAGCAATTCTGGGCTGTG
AAGACTCCAACCCTTATCCTGTATGGAGAGCTGGACCACATCCTGGCTCGAGAGTCACTGCGGCAGCTCC
GCCACCTGCCCAACCACTCTGTGGTGAAGCTACGCAATGCAGGCCATGCCTGTTACCTCCACAAGCCGCA
AGACTTCCACCTTGTCCTGCTTGCCTTCCTTGACCATCTACCTTGA

Translation (271 aa):
MVGALCGCWFRLGGARPLIPLGPTVVQTSMSRSQVALLGLSLLLMLLLYVGLPGPPEQTSCLWGDPNVTV
LAGLTPGNSPIFYREVLPLNQAHRVEVVLLHGKAFNSHTWEQLGTLQLLSQRGYRAVALDLPGFGNSAPS
KEASTEAGRAALLERALRDLEVQNAVLVSPSLSGHYALPFLMRGHHQLHGFVPIAPTSTQNYTQEQFWAV
KTPTLILYGELDHILARESLRQLRHLPNHSVVKLRNAGHACYLHKPQDFHLVLLAFLDHLP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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