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Report for CCDS31132.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31132.1 Public Homo sapiens 10 GTPBP4 24 110 108 CCDS HistoryNCBI Gene:23560Re-query CCDS DB by CCDS ID:31132.1See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31132.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000360803.9 ENSP00000354040.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000360803.9Link to Ensembl Protein Viewer:ENSP00000354040.4Re-query CCDS DB by Nucleotide ID:ENST00000360803Re-query CCDS DB by Protein ID:ENSP00000354040
Original member Current member NCBI NM_012341.3 NP_036473.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_012341.3Link to Protein Sequence:NP_036473.2Re-query CCDS DB by Nucleotide ID:NM_012341Re-query CCDS DB by Protein ID:NP_036473Link to BLAST:NP_036473.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036473.2 634 Q9BZE4-1 634 100% 0 0

Chromosomal Locations for CCDS 31132.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 988480 988527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 992489 992659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 995929 996032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 996106 996242 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 997208 997308 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 999003 999095 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 1000677 1000868 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 1000948 1001013 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 1005818 1005907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 1007018 1007128 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 1008958 1009035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 1009529 1009580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 1010420 1010520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 1012465 1012662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 1014247 1014312 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 1015753 1015896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 1017075 1017227 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1905 nt):
ATGGCACATTACAACTTCAAGAAAATTACGGTGGTGCCGTCCGCCAAGGACTTCATAGACCTCACGTTGT
CGAAGACTCAACGAAAGACTCCAACCGTTATTCATAAACATTACCAAATACATCGCATTAGACATTTTTA
CATGAGAAAAGTCAAATTTACTCAACAGAATTACCATGATAGACTTTCACAAATTCTAACAGATTTCCCC
AAATTGGATGATATTCATCCGTTCTATGCTGATTTGATGAATATTCTCTACGACAAGGATCATTACAAGT
TGGCTCTGGGGCAAATAAATATTGCCAAAAATTTAGTGGACAATGTTGCTAAAGATTATGTGCGACTGAT
GAAGTATGGCGACTCTCTCTACCGCTGCAAACAGCTGAAGCGTGCGGCCCTGGGACGGATGTGCACAGTG
ATCAAGAGGCAGAAGCAGAGTTTGGAGTATTTGGAGCAAGTGCGTCAGCATTTATCCCGTTTGCCAACCA
TTGATCCGAATACCAGGACCCTGCTTTTGTGTGGGTACCCAAATGTTGGGAAGTCCAGCTTCATCAACAA
GGTGACGAGAGCAGACGTGGATGTCCAGCCCTATGCGTTCACAACCAAGTCTCTGTTTGTTGGGCACATG
GATTATAAGTATCTACGTTGGCAGGTTGTAGACACTCCTGGGATCCTGGACCACCCTCTGGAGGATAGGA
ACACCATCGAGATGCAGGCCATCACTGCCCTGGCCCACCTCCGTGCTGCGGTCCTGTATGTGATGGATTT
GTCTGAGCAGTGTGGGCATGGGCTGAGGGAGCAGCTAGAACTCTTCCAGAACATCAGACCTCTCTTCATC
AACAAGCCTCTCATAGTTGTAGCCAACAAATGTGATGTGAAGAGAATAGCTGAACTTTCTGAAGATGATC
AGAAAATATTTACAGATTTGCAGTCTGAAGGATTCCCTGTAATAGAGACCAGCACCCTGACTGAGGAAGG
TGTTATTAAAGTTAAAACAGAGGCTTGCGATAGGCTTTTGGCTCATCGAGTGGAAACCAAAATGAAGGGA
AATAAAGTGAATGAGGTGCTGAATAGACTGCACCTGGCTATCCCAACCAGGAGGGACGATAAGGAGAGGC
CCCCTTTCATCCCTGAAGGAGTGGTGGCTCGCAGGAAGAGGATGGAAACTGAGGAGTCCAGGAAGAAGAG
GGAACGAGATCTTGAGCTGGAAATGGGAGATGATTATATTTTGGATCTTCAGAAGTACTGGGATTTAATG
AATTTGTCTGAAAAACATGATAAGATACCAGAAATCTGGGAAGGCCATAATATAGCTGATTATATTGATC
CAGCCATCATGAAGAAATTGGAAGAATTAGAAAAAGAAGAAGAGCTGAGAACAGCTGCTGGAGAGTATGA
CAGTGTATCTGAGAGTGAAGACGAAGAGATGCTGGAAATCCGACAGCTGGCAAAGCAAATTCGAGAGAAA
AAGAAGTTGAAAATTCTGGAGTCCAAAGAAAAGAATACACAGGGACCCAGGATGCCGCGAACTGCTAAGA
AGGTTCAGAGGACAGTTTTGGAGAAGGAGATGCGTAGTCTTGGTGTTGACATGGACGATAAAGACGATGC
CCATTACGCAGTCCAGGCAAGAAGATCCCGGAGCATCACTAGGAAAAGAAAGCGGGAAGACTCTGCTCCC
CCGTCCTCTGTGGCCCGGAGTGGGAGTTGCTCTCGAACTCCACGTGACGTTTCTGGTCTTAGGGATGTCA
AGATGGTGAAGAAAGCCAAGACTATGATGAAGAATGCTCAGAAGAAGATGAATCGGTTGGGGAAGAAAGG
GGAGGCGGATAGACACGTGTTTGATATGAAGCCCAAGCACTTGCTGTCTGGGAAGAGGAAAGCTGGTAAA
AAGGACAGGAGATAG

Translation (634 aa):
MAHYNFKKITVVPSAKDFIDLTLSKTQRKTPTVIHKHYQIHRIRHFYMRKVKFTQQNYHDRLSQILTDFP
KLDDIHPFYADLMNILYDKDHYKLALGQINIAKNLVDNVAKDYVRLMKYGDSLYRCKQLKRAALGRMCTV
IKRQKQSLEYLEQVRQHLSRLPTIDPNTRTLLLCGYPNVGKSSFINKVTRADVDVQPYAFTTKSLFVGHM
DYKYLRWQVVDTPGILDHPLEDRNTIEMQAITALAHLRAAVLYVMDLSEQCGHGLREQLELFQNIRPLFI
NKPLIVVANKCDVKRIAELSEDDQKIFTDLQSEGFPVIETSTLTEEGVIKVKTEACDRLLAHRVETKMKG
NKVNEVLNRLHLAIPTRRDDKERPPFIPEGVVARRKRMETEESRKKRERDLELEMGDDYILDLQKYWDLM
NLSEKHDKIPEIWEGHNIADYIDPAIMKKLEELEKEEELRTAAGEYDSVSESEDEEMLEIRQLAKQIREK
KKLKILESKEKNTQGPRMPRTAKKVQRTVLEKEMRSLGVDMDDKDDAHYAVQARRSRSITRKRKREDSAP
PSSVARSGSCSRTPRDVSGLRDVKMVKKAKTMMKNAQKKMNRLGKKGEADRHVFDMKPKHLLSGKRKAGK
KDRR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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