NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS11091.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11091.1 Public Homo sapiens 17 DVL2 24 110 108 CCDS HistoryNCBI Gene:1856Re-query CCDS DB by CCDS ID:11091.1See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11091.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000005340.10 ENSP00000005340.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000005340.10Link to Ensembl Protein Viewer:ENSP00000005340.4Re-query CCDS DB by Nucleotide ID:ENST00000005340Re-query CCDS DB by Protein ID:ENSP00000005340
Original member Current member NCBI NM_004422.3 NP_004413.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004422.3Link to Protein Sequence:NP_004413.1Re-query CCDS DB by Nucleotide ID:NM_004422Re-query CCDS DB by Protein ID:NP_004413Link to BLAST:NP_004413.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004413.1 736 O14641 736 100% 0 0

Chromosomal Locations for CCDS 11091.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 7225865 7226313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7226421 7226639 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7227090 7227269 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7227404 7227535 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7227655 7227783 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7227977 7228044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7228969 7229045 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7229135 7229274 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7229378 7229447 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7229588 7229678 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7229808 7229943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7230046 7230155 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7230285 7230430 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7230728 7230797 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7234069 7234262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2211 nt):
ATGGCGGGTAGCAGCACTGGGGGCGGTGGGGTTGGGGAGACGAAGGTGATTTACCACCTGGATGAGGAAG
AGACTCCCTACCTGGTGAAGATCCCTGTCCCCGCCGAGCGCATCACCCTCGGCGATTTCAAGAGCGTCCT
GCAGCGGCCCGCGGGCGCCAAGTACTTTTTCAAGTCTATGGATCAGGATTTCGGGGTGGTGAAGGAAGAA
ATTTCAGATGACAACGCCCGCCTCCCCTGCTTCAACGGAAGGGTGGTATCCTGGCTGGTGTCCTCAGATA
ATCCCCAACCCGAGATGGCCCCTCCAGTCCATGAGCCTCGGGCAGAACTGGCGCCTCCAGCCCCACCTTT
ACCTCCTTTGCCACCCGAGAGGACCAGCGGCATTGGGGACTCAAGGCCTCCATCCTTCCACCCTAATGTG
TCCAGCAGCCATGAGAATCTGGAGCCTGAGACAGAAACCGAGTCAGTAGTGTCACTGAGGCGGGAGCGGC
CTCGCAGGAGAGACAGCAGTGAGCATGGCGCTGGGGGCCACAGGACTGGTGGCCCCTCAAGGCTGGAGCG
CCACCTGGCCGGATACGAGAGCTCCTCTACCCTCATGACCAGCGAGCTGGAGAGTACCAGCCTGGGGGAC
TCGGACGAGGAGGACACCATGAGCAGGTTCAGCAGCTCCACGGAGCAGAGCAGTGCCTCCCGCCTCCTTA
AGCGCCACCGGCGGCGAAGGAAGCAGAGGCCACCCCGCCTGGAGAGGACGTCATCCTTCAGCAGCGTCAC
AGATTCCACAATGTCTCTCAATATCATCACAGTCACGCTAAACATGGAGAAGTACAACTTCCTGGGTATC
TCCATTGTTGGCCAGAGCAATGAGCGGGGAGACGGAGGCATCTACATTGGCTCCATCATGAAGGGTGGGG
CTGTGGCGGCCGACGGGCGCATTGAGCCAGGGGACATGCTTTTGCAGGTGAATGACATGAACTTTGAGAA
CATGAGCAACGATGACGCTGTGCGGGTGCTGAGGGACATTGTGCACAAGCCTGGCCCCATTGTGCTGACT
GTGGCCAAGTGCTGGGATCCCTCTCCTCAGGCCTATTTCACTCTCCCCCGAAATGAGCCCATCCAGCCAA
TTGACCCTGCTGCCTGGGTGTCCCATTCCGCGGCTCTGACTGGCACCTTCCCAGCCTATCCAGGTTCCTC
CTCCATGAGCACCATTACATCTGGATCGTCTTTGCCTGATGGCTGTGAAGGCCGGGGTCTCTCCGTCCAT
ACGGACATGGCATCGGTGACCAAGGCCATGGCAGCTCCAGAGTCTGGACTGGAAGTCCGGGACCGCATGT
GGCTCAAGATCACCATCCCTAATGCCTTTCTGGGCTCGGATGTGGTTGACTGGCTCTACCATCACGTGGA
GGGCTTTCCTGAGCGGCGGGAGGCCCGCAAGTATGCCAGCGGGCTGCTCAAAGCAGGCCTGATCCGACAC
ACCGTCAACAAGATCACCTTCTCTGAGCAGTGCTATTACGTCTTCGGAGACCTCAGTGGTGGCTGTGAGA
GCTACCTAGTCAACCTGTCTCTCAATGACAACGATGGCTCCAGTGGGGCTTCAGACCAGGATACCCTGGC
TCCTCTGCCTGGGGCCACCCCCTGGCCCCTGCTGCCCACTTTCTCCTACCAATACCCTGCCCCACACCCC
TACAGCCCGCAGCCTCCACCCTACCATGAGCTTTCATCTTACACCTATGGTGGGGGCAGTGCCAGCAGCC
AGCATAGTGAGGGCAGCCGGAGCAGTGGGTCGACACGGAGTGATGGGGGGGCAGGGCGCACGGGGAGGCC
CGAGGAGCGGGCCCCCGAGTCCAAGTCCGGCAGTGGCAGTGAGTCTGAGCCCTCCAGCCGAGGGGGCAGC
CTTCGGCGGGGTGGGGAAGCAAGTGGGACTAGCGATGGGGGCCCTCCTCCATCCAGAGGCTCAACTGGGG
GTGCCCCTAATCTCCGAGCCCACCCAGGGCTCCATCCCTATGGACCGCCCCCTGGCATGGCCCTCCCCTA
CAACCCCATGATGGTGGTCATGATGCCCCCACCTCCACCTCCAGTCCCTCCAGCAGTGCAGCCTCCGGGG
GCCCCTCCAGTCAGAGACCTGGGCTCTGTGCCCCCAGAACTGACAGCCAGCCGCCAAAGCTTCCACATGG
CCATGGGCAATCCCAGCGAGTTCTTTGTGGATGTTATGTAG

Translation (736 aa):
MAGSSTGGGGVGETKVIYHLDEEETPYLVKIPVPAERITLGDFKSVLQRPAGAKYFFKSMDQDFGVVKEE
ISDDNARLPCFNGRVVSWLVSSDNPQPEMAPPVHEPRAELAPPAPPLPPLPPERTSGIGDSRPPSFHPNV
SSSHENLEPETETESVVSLRRERPRRRDSSEHGAGGHRTGGPSRLERHLAGYESSSTLMTSELESTSLGD
SDEEDTMSRFSSSTEQSSASRLLKRHRRRRKQRPPRLERTSSFSSVTDSTMSLNIITVTLNMEKYNFLGI
SIVGQSNERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRDIVHKPGPIVLT
VAKCWDPSPQAYFTLPRNEPIQPIDPAAWVSHSAALTGTFPAYPGSSSMSTITSGSSLPDGCEGRGLSVH
TDMASVTKAMAAPESGLEVRDRMWLKITIPNAFLGSDVVDWLYHHVEGFPERREARKYASGLLKAGLIRH
TVNKITFSEQCYYVFGDLSGGCESYLVNLSLNDNDGSSGASDQDTLAPLPGATPWPLLPTFSYQYPAPHP
YSPQPPPYHELSSYTYGGGSASSQHSEGSRSSGSTRSDGGAGRTGRPEERAPESKSGSGSESEPSSRGGS
LRRGGEASGTSDGGPPPSRGSTGGAPNLRAHPGLHPYGPPPGMALPYNPMMVVMMPPPPPPVPPAVQPPG
APPVRDLGSVPPELTASRQSFHMAMGNPSEFFVDVM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH