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Report for CCDS966.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
966.1 Public Homo sapiens 1 GOLPH3L 24 110 108 CCDS HistoryNCBI Gene:55204Re-query CCDS DB by CCDS ID:966.1Re-query CCDS DB by GeneID:55204See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 966.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000271732.8 ENSP00000271732.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000271732.8Link to Ensembl Protein Viewer:ENSP00000271732.3Re-query CCDS DB by Nucleotide ID:ENST00000271732Re-query CCDS DB by Protein ID:ENSP00000271732
Original member Current member NCBI NM_018178.6 NP_060648.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018178.6Link to Protein Sequence:NP_060648.2Re-query CCDS DB by Nucleotide ID:NM_018178Re-query CCDS DB by Protein ID:NP_060648Link to BLAST:NP_060648.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060648.2 285 Q9H4A5-1 285 100% 0 0

Chromosomal Locations for CCDS 966.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 150648321 150648748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 150661814 150661928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 150663632 150663763 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 150694656 150694838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (858 nt):
ATGACCACTTTAACTCACCGGGCCCGTCGCACTGAAATAAGCAAGAACTCTGAAAAGAAGATGGAAAGTG
AGGAAGACAGTAATTGGGAGAAAAGTCCAGACAATGAAGATTCTGGAGACTCTAAGGATATCCGCCTTAC
TCTTATGGAAGAAGTATTGCTTCTGGGACTAAAAGATAAAGAGGGGTACACATCTTTCTGGAATGACTGC
ATATCATCAGGCCTGCGAGGGGGCATCCTGATAGAGCTGGCCATGCGGGGTCGAATCTATCTGGAACCCC
CGACCATGCGTAAGAAGCGACTACTAGACAGAAAGGTACTGCTAAAGTCAGACAGCCCAACAGGTGATGT
TTTACTGGATGAAACTCTGAAACACATCAAAGCAACTGAACCCACAGAAACTGTCCAAACATGGATAGAG
CTACTCACTGGTGAGACCTGGAACCCCTTCAAATTACAGTACCAGCTGAGAAATGTACGAGAGCGCATCG
CAAAGAACCTAGTAGAGAAAGGTATTCTAACCACTGAGAAGCAGAATTTCCTGCTATTTGACATGACTAC
TCATCCAGTGACCAATACAACAGAGAAACAGCGACTAGTGAAAAAACTTCAAGATAGTGTACTAGAGCGG
TGGGTAAATGACCCTCAGCGTATGGACAAGCGAACACTAGCACTCCTGGTGCTAGCCCACTCCTCTGATG
TGCTAGAGAATGTCTTCTCCTCTCTGACAGATGACAAGTATGATGTGGCAATGAATCGAGCCAAGGACTT
AGTAGAACTGGACCCTGAAGTGGAAGGGACAAAGCCTAGTGCCACAGAAATGATCTGGGCTGTGCTGGCA
GCCTTCAATAAATCTTAA

Translation (285 aa):
MTTLTHRARRTEISKNSEKKMESEEDSNWEKSPDNEDSGDSKDIRLTLMEEVLLLGLKDKEGYTSFWNDC
ISSGLRGGILIELAMRGRIYLEPPTMRKKRLLDRKVLLKSDSPTGDVLLDETLKHIKATEPTETVQTWIE
LLTGETWNPFKLQYQLRNVRERIAKNLVEKGILTTEKQNFLLFDMTTHPVTNTTEKQRLVKKLQDSVLER
WVNDPQRMDKRTLALLVLAHSSDVLENVFSSLTDDKYDVAMNRAKDLVELDPEVEGTKPSATEMIWAVLA
AFNKS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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