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Genome Displays Related Resources Gene HomoloGene MANE RefSeq
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Report for CCDS9593.2 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
9593.2 |
Under review, update |
Homo sapiens |
14 |
SLC22A17 |
24 |
110 |
108 |
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Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)
Attributes |
Non-AUG initiation codon |
Sequence IDs included in CCDS 9593.2
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENST00000397267.6 |
ENSP00000380437.2 |
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Accepted |
alive |
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NCBI |
NM_020372.4 |
NP_065105.3 |
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Pending |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_065105.3 |
649 |
Q8WUG5-1 |
649 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 9593.2
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. This works on the replacement symbol in the Translation Exceptions section also. |
Translation Exceptions: replace the symbol L (codon CTG) with M at amino acid position 1
Nucleotide Sequence (1950 nt): CTGGCTCCCCGGGTGGCCACCGGGACCCCCGAGCCCAATGGCGGGGGCGGCGGCAAAATCGACAACACTG TAGAGATCACCCCCACCTCCAACGGACAGGTCGGGACCCTCGGAGATGCGGTGCCCACGGAGCAGCTGCA GGGTGAGCGGGAGCGCGAGCGGGAGGGGGAGGGAGACGCGGGCGGCGACGGACTGGGCAGCAGCCTGTCG CTGGCCGTGCCCCCAGGCCCCCTCAGCTTTGAGGCGCTGCTCGCCCAGGTGGGGGCGCTGGGCGGCGGCC AGCAGCTGCAGCTCGGCCTCTGCTGCCTGCCGGTGCTCTTCGTGGCTCTGGGCATGGCCTCGGACCCCAT CTTCACGCTGGCGCCCCCGCTGCATTGCCACTACGGGGCCTTCCCCCCTAATGCCTCTGGCTGGGAGCAG CCTCCCAATGCCAGCGGCGTCAGCGTCGCCAGCGCTGCCCTAGCAGCCAGCGCCGCCAGCCGTGTCGCCA CCAGTACCGACCCCTCGTGCAGCGGCTTCGCCCCGCCGGACTTCAACCATTGCCTCAAGGATTGGGACTA TAATGGCCTTCCTGTGCTCACCACCAACGCCATCGGCCAGTGGGATCTGGTGTGTGACCTGGGCTGGCAG GTGATCCTGGAGCAGATCCTCTTCATCTTGGGCTTTGCCTCCGGCTACCTGTTCCTGGGTTACCCCGCAG ACAGATTTGGCCGTCGCGGGATTGTGCTGCTGACCTTGGGGCTGGTGGGCCCCTGTGGAGTAGGAGGGGC TGCTGCAGGCTCCTCCACAGGCGTCATGGCCCTCCGATTCCTCTTGGGCTTTCTGCTTGCCGGTGTTGAC CTGGGTGTCTACCTGATGCGCCTGGAGCTGTGCGACCCAACCCAGAGGCTTCGGGTGGCCCTGGCAGGGG AGTTGGTGGGGGTGGGAGGGCACTTCCTGTTCCTGGGCCTGGCCCTTGTCTCTAAGGATTGGCGATTCCT ACAGCGAATGATCACCGCTCCCTGCATCCTCTTCCTGTTTTATGGCTGGCCTGGTTTGTTCCTGGAGTCC GCACGGTGGCTGATAGTGAAGCGGCAGATTGAGGAGGCTCAGTCTGTGCTGAGGATCCTGGCTGAGCGAA ACCGGCCCCATGGGCAGATGCTGGGGGAGGAGGCCCAGGAGGCCCTGCAGGACCTGGAGAATACCTGCCC TCTCCCTGCAACATCCTCCTTTTCCTTTGCTTCCCTCCTCAACTACCGCAACATCTGGAAAAATCTGCTT ATCCTGGGCTTCACCAACTTCATTGCCCATGCCATTCGCCACTGCTACCAGCCTGTGGGAGGAGGAGGGA GCCCATCGGACTTCTACCTGTGCTCTCTGCTGGCCAGCGGCACCGCAGCCCTGGCCTGTGTCTTCCTGGG GGTCACCGTGGACCGATTTGGCCGCCGGGGCATCCTTCTTCTCTCCATGACCCTTACCGGCATTGCTTCC CTGGTCCTGCTGGGCCTGTGGGATTGTGAGCATCCTATCTTCCCCACAGTGTGGGCTCAACAAGGGAACC CCAACAGAGATCTGAACGAGGCTGCCATCACCACTTTCTCTGTCCTTGGGCTCTTCTCCTCCCAAGCTGC CGCCATCCTCAGCACCCTCCTTGCTGCTGAGGTCATCCCCACCACTGTCCGGGGCCGTGGCCTGGGCCTG ATCATGGCTCTAGGGGCGCTTGGAGGACTGAGCGGCCCGGCCCAGCGCCTCCACATGGGCCATGGAGCCT TCCTGCAGCACGTGGTGCTGGCGGCCTGCGCCCTCCTCTGCATTCTCAGCATTATGCTGCTGCCGGAGAC CAAGCGCAAGCTCCTGCCCGAGGTGCTCCGGGACGGGGAGCTGTGTCGCCGGCCTTCCCTGCTGCGGCAG CCACCCCCTACCCGCTGTGACCACGTCCCGCTGCTTGCCACCCCCAACCCTGCCCTCTGA
Translation (649 aa): MAPRVATGTPEPNGGGGGKIDNTVEITPTSNGQVGTLGDAVPTEQLQGEREREREGEGDAGGDGLGSSLS LAVPPGPLSFEALLAQVGALGGGQQLQLGLCCLPVLFVALGMASDPIFTLAPPLHCHYGAFPPNASGWEQ PPNASGVSVASAALAASAASRVATSTDPSCSGFAPPDFNHCLKDWDYNGLPVLTTNAIGQWDLVCDLGWQ VILEQILFILGFASGYLFLGYPADRFGRRGIVLLTLGLVGPCGVGGAAAGSSTGVMALRFLLGFLLAGVD LGVYLMRLELCDPTQRLRVALAGELVGVGGHFLFLGLALVSKDWRFLQRMITAPCILFLFYGWPGLFLES ARWLIVKRQIEEAQSVLRILAERNRPHGQMLGEEAQEALQDLENTCPLPATSSFSFASLLNYRNIWKNLL ILGFTNFIAHAIRHCYQPVGGGGSPSDFYLCSLLASGTAALACVFLGVTVDRFGRRGILLLSMTLTGIAS LVLLGLWDCEHPIFPTVWAQQGNPNRDLNEAAITTFSVLGLFSSQAAAILSTLLAAEVIPTTVRGRGLGL IMALGALGGLSGPAQRLHMGHGAFLQHVVLAACALLCILSIMLLPETKRKLLPEVLRDGELCRRPSLLRQ PPPTRCDHVPLLATPNPAL
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