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Report for CCDS92418.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92418.1 Public Homo sapiens 17 GPS1 24 110 108 CCDS HistoryNCBI Gene:2873Re-query CCDS DB by CCDS ID:92418.1Re-query CCDS DB by GeneID:2873See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92418.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000623761.3 ENSP00000485035.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000623761.3Link to Ensembl Protein Viewer:ENSP00000485035.1Re-query CCDS DB by Nucleotide ID:ENST00000623761Re-query CCDS DB by Protein ID:ENSP00000485035
Original member Current member NCBI NM_001394761.1 NP_001381690.1 Accepted alive Link to Nucleotide Sequence:NM_001394761.1Link to Protein Sequence:NP_001381690.1Re-query CCDS DB by Nucleotide ID:NM_001394761Re-query CCDS DB by Protein ID:NP_001381690Link to BLAST:NP_001381690.1

Chromosomal Locations for CCDS 92418.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 82052307 82052459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 82053274 82053366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 82053868 82054049 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 82054510 82054810 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 82054898 82054975 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 82055165 82055222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 82055740 82055825 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 82056001 82056095 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 82056286 82056391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 82056470 82056550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 82056629 82056766 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 82056840 82056974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 82057053 82057127 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1581 nt):
ATGAGGGATAGCTCGGCCCCCAGCTCGGCCTCCTCGTCAGTGACAGATCTGTACTGCACCCCTCACAGCA
GTAGGTCAGACCTCGTCCTGCCCGGCACGGCCGGGGACTTCAGCCTGAGCGCCAGCCTGTCGGCCTGTAC
GCTGCTCTACGAGGGGGCCGTGGAGCCCATGCAGATCGACGTGGACCCCCAGGAAGACCCGCAGAATGCA
CCTGACGTCAACTACGTGGTGGAGAACCCCAGCCTGGATCTGGAACAGTACGCGGCCAGCTACAGCGGCC
TGATGCGCATCGAACGGCTGCAGTTCATTGCTGATCACTGCCCCACGCTGCGGGTGGAGGCCCTGAAGAT
GGCCCTCTCCTTCGTGCAGAGAACCTTTAACGTGGACATGTACGAGGAGATCCACCGCAAGCTCTCAGAG
GCCACCAGGGAGCTGCAGAACGCACCCGACGCCATCCCTGAGAGCGGCGTGGAGCCCCCAGCCCTGGACA
CGGCCTGGGTGGAGGCCACGCGGAAGAAGGCGCTGCTGAAGCTGGAGAAGCTGGACACAGACCTGAAGAA
CTACAAGGGCAACTCCATCAAAGAGAGCATCCGGCGCGGCCACGACGACCTGGGCGACCACTACCTGGAC
TGTGGGGACCTCAGCAACGCCCTCAAGTGCTATTCCCGGGCCCGGGACTACTGCACCAGCGCCAAACACG
TCATCAACATGTGCCTCAATGTCATCAAGGTCAGCGTCTACTTGCAGAATTGGTCTCATGTGCTCAGCTA
CGTCAGCAAGGCTGAGTCCACCCCAGAGATTGCCGAGCGAGGAGAGCGTGACAGCCAGACCCAGGCCATC
CTCACCAAGCTCAAGTGTGCCGCAGGCTTGGCAGAGCTGGCCGCCAGGAAGTACAAGCAGGCTGCCAAGT
GCCTCCTGCTGGCTTCCTTTGATCACTGTGACTTCCCTGAGCTGCTGTCCCCCAGCAACGTGGCCATCTA
CGGTGGCCTGTGCGCCTTGGCTACCTTTGACCGGCAGGAGCTGCAGCGCAATGTCATCTCCAGCAGCTCC
TTCAAGTTGTTCTTGGAGCTGGAGCCACAGGTCCGAGACATCATCTTCAAATTCTACGAGTCCAAGTACG
CCTCATGTCTCAAGATGCTGGACGAGATGAAGGACAACCTGCTCCTGGACATGTATCTGGCCCCCCATGT
CAGGACCCTGTACACCCAGATTCGCAACCGTGCCCTCATCCAGTATTTCAGCCCCTACGTGTCAGCCGAC
ATGCATAGGATGGCGGCAGCCTTCAATACCACGGTGGCCGCCCTGGAGGACGAGCTGACGCAGCTAATCC
TGGAGGGGCTGATCAGTGCCCGTGTGGACTCACACAGCAAGATCCTATACGCCCGGGACGTGGATCAGCG
CAGCACCACCTTTGAGAAGTCTCTGTTGATGGGCAAGGAGTTCCAGCGCCGCGCCAAGGCCATGATGCTG
CGGGCAGCTGTGCTCCGCAACCAGATCCATGTCAAGTCCCCGCCCAGAGAAGGGAGCCAGGGGGAGCTGA
CTCCAGCCAACAGCCAGTCCCGGATGAGCACCAACATGTGA

Translation (526 aa):
MRDSSAPSSASSSVTDLYCTPHSSRSDLVLPGTAGDFSLSASLSACTLLYEGAVEPMQIDVDPQEDPQNA
PDVNYVVENPSLDLEQYAASYSGLMRIERLQFIADHCPTLRVEALKMALSFVQRTFNVDMYEEIHRKLSE
ATRELQNAPDAIPESGVEPPALDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLD
CGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEIAERGERDSQTQAI
LTKLKCAAGLAELAARKYKQAAKCLLLASFDHCDFPELLSPSNVAIYGGLCALATFDRQELQRNVISSSS
FKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSAD
MHRMAAAFNTTVAALEDELTQLILEGLISARVDSHSKILYARDVDQRSTTFEKSLLMGKEFQRRAKAMML
RAAVLRNQIHVKSPPREGSQGELTPANSQSRMSTNM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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