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Report for CCDS8914.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8914.1 Public Homo sapiens 12 CNPY2 24 110 108 CCDS HistoryNCBI Gene:10330Re-query CCDS DB by CCDS ID:8914.1Re-query CCDS DB by GeneID:10330See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8914.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000273308.9 ENSP00000273308.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000273308.9Link to Ensembl Protein Viewer:ENSP00000273308.4Re-query CCDS DB by Nucleotide ID:ENST00000273308Re-query CCDS DB by Protein ID:ENSP00000273308
Original member Current member NCBI NM_014255.7 NP_055070.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014255.7Link to Protein Sequence:NP_055070.1Re-query CCDS DB by Nucleotide ID:NM_014255Re-query CCDS DB by Protein ID:NP_055070Link to BLAST:NP_055070.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055070.1 182 Q9Y2B0-1 182 100% 0 0

Chromosomal Locations for CCDS 8914.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 56310552 56310595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 56310958 56311054 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 56311211 56311414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 56314851 56314966 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 56315130 56315217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (549 nt):
ATGAAAGGCTGGGGTTGGCTGGCCCTGCTTCTGGGGGCCCTGCTGGGAACCGCCTGGGCTCGGAGGAGCC
AGGATCTCCACTGTGGAGCATGCAGGGCTCTGGTGGATGAACTAGAATGGGAAATTGCCCAGGTGGACCC
CAAGAAGACCATTCAGATGGGATCTTTCCGGATCAATCCAGATGGCAGCCAGTCAGTGGTGGAGGTGCCT
TATGCCCGCTCAGAGGCCCACCTCACAGAGCTGCTGGAGGAGATATGTGACCGGATGAAGGAGTATGGGG
AACAGATTGATCCTTCCACCCATCGCAAGAACTACGTACGTGTAGTGGGCCGGAATGGAGAATCCAGTGA
ACTGGACCTACAAGGCATCCGAATCGACTCAGATATTAGCGGCACCCTCAAGTTTGCGTGTGAGAGCATT
GTGGAGGAATACGAGGATGAACTCATTGAATTCTTTTCCCGAGAGGCTGACAATGTTAAAGACAAACTTT
GCAGTAAGCGAACAGATCTTTGTGACCATGCCCTGCACATATCGCATGATGAGCTATGA

Translation (182 aa):
MKGWGWLALLLGALLGTAWARRSQDLHCGACRALVDELEWEIAQVDPKKTIQMGSFRINPDGSQSVVEVP
YARSEAHLTELLEEICDRMKEYGEQIDPSTHRKNYVRVVGRNGESSELDLQGIRIDSDISGTLKFACESI
VEEYEDELIEFFSREADNVKDKLCSKRTDLCDHALHISHDEL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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