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Report for CCDS8894.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8894.1 Public Homo sapiens 12 DNAJC14 24 110 108 CCDS HistoryNCBI Gene:85406Re-query CCDS DB by CCDS ID:8894.1Re-query CCDS DB by GeneID:85406See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8894.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000317287.5 ENSP00000317500.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000317287.5Link to Ensembl Protein Viewer:ENSP00000317500.5Re-query CCDS DB by Nucleotide ID:ENST00000317287Re-query CCDS DB by Protein ID:ENSP00000317500
Original member Current member EBI ENST00000357606.7 ENSP00000350223.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000357606.7Link to Ensembl Protein Viewer:ENSP00000350223.3Re-query CCDS DB by Nucleotide ID:ENST00000357606Re-query CCDS DB by Protein ID:ENSP00000350223
Original member Current member EBI ENST00000546957.2 ENSP00000448876.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000546957.2Link to Ensembl Protein Viewer:ENSP00000448876.2Re-query CCDS DB by Nucleotide ID:ENST00000546957Re-query CCDS DB by Protein ID:ENSP00000448876
Original member Current member EBI ENST00000547445.2 ENSP00000450196.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000547445.2Link to Ensembl Protein Viewer:ENSP00000450196.2Re-query CCDS DB by Nucleotide ID:ENST00000547445Re-query CCDS DB by Protein ID:ENSP00000450196
Original member Current member EBI ENST00000678005.2 ENSP00000504134.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000678005.2Link to Ensembl Protein Viewer:ENSP00000504134.1Re-query CCDS DB by Nucleotide ID:ENST00000678005Re-query CCDS DB by Protein ID:ENSP00000504134
Original member Current member NCBI NM_001394687.1 NP_001381616.1 Accepted alive Link to Nucleotide Sequence:NM_001394687.1Link to Protein Sequence:NP_001381616.1Re-query CCDS DB by Nucleotide ID:NM_001394687Re-query CCDS DB by Protein ID:NP_001381616Link to BLAST:NP_001381616.1
Original member Current member NCBI NM_001394688.1 NP_001381617.1 Accepted alive Link to Nucleotide Sequence:NM_001394688.1Link to Protein Sequence:NP_001381617.1Re-query CCDS DB by Nucleotide ID:NM_001394688Re-query CCDS DB by Protein ID:NP_001381617Link to BLAST:NP_001381617.1
Original member Current member NCBI NM_001394689.1 NP_001381618.1 Accepted alive Link to Nucleotide Sequence:NM_001394689.1Link to Protein Sequence:NP_001381618.1Re-query CCDS DB by Nucleotide ID:NM_001394689Re-query CCDS DB by Protein ID:NP_001381618Link to BLAST:NP_001381618.1
Original member Current member NCBI NM_032364.6 NP_115740.5 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032364.6Link to Protein Sequence:NP_115740.5Re-query CCDS DB by Nucleotide ID:NM_032364Re-query CCDS DB by Protein ID:NP_115740Link to BLAST:NP_115740.5

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001381616.1 702 Q6Y2X3 702 100% 0 0
NP_001381617.1 702 Q6Y2X3 702 100% 0 0
NP_001381618.1 702 Q6Y2X3 702 100% 0 0
NP_115740.5 702 Q6Y2X3 702 100% 0 0

Chromosomal Locations for CCDS 8894.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 55821977 55822187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 55822373 55822475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 55822572 55822732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 55823070 55823189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 55823402 55823508 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 55827252 55828658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2109 nt):
ATGGCCCAGAAGCACCCCGGAGAAAGAGGGTTGTATGGAGCCCACCACAGTGGTGGTGCCTCCCTCAGGA
CTTTAGGACCCTCCGTGGACCCTGAAATACCTTCATTCTCAGGACTCAGGGACTCAGCAGGGACTGCTCC
TAATGGTACCCGCTGCCTCACAGAGCACTCTGGTCCTAAGCACACACAGCACCCAAACCCAGCCCATTGG
TTGGACCCAAGCCATGGCCCCCCAGGGGGTCCAGGACCACCTAGAGATGCAGAGGACCCTGATCAGAGTG
AGACGTCTTCAGAAGAAGAATCAGGAGTGGACCAGGAACTCTCAAAAGAAAACGAGACTGGGAACCAGAA
GGATGGGAACTCTTTTCTTTCCATTCCATCTGCTTGCAACTGCCAGGGAACACCTGGAATTCCAGAAGGG
CCTTACTCTGAGGGAGGAAATGGTTCTTCTAGCAACTTTTGCCACCACTGTACCTCTCCAGCTTTGGGGG
AAGATGAGTTGGAAGAGGAATATGATGATGAAGAATCTCTCAAGTTCCCCAGTGATTTTTCACGTGTGTC
CAGCGGAAAGAAACCCCCATCCCGGAGACAGCGGCACCGCTTTCCAACGAAGGAGGATACTCGGGAGGGT
GGACGTAGGGATCCCAGGTCCCCTGGTCGACATCGGCTGGGTCGGAAACGAAGTCAGGCAGATAAGCGCA
AAGGCCTGGGATTGTGGGGAGCCGAGGAACTATGTCAACTTGGACAGGCAGGCTTTTGGTGGCTGATTGA
ACTGCTGGTATTGGTGGGAGAGTACGTAGAAACTTGTGGCCATCTCATCTATGCCTGCAGGCAACTGAAA
AGCAGTGATTTGGACCTTTTTCGAGTTTGGATGGGAGTGTGGACAGGGCGGTTAGGGGGCTGGGCCCAGG
TCATGTTTCAGTTTCTAAGCCAGGGGTTTTACTGTGGAGTAGGACTGTTTACTCGTTTTCTTAAGCTGCT
GGGTGCTTTGCTGCTCCTGGCTCTGGCCCTCTTTTTGGGCTTTCTACAGTTGGGATGGCGGTTTCTGGTG
GGACTAGGTGACCGGTTAGGCTGGAGGGATAAGGCTACCTGGCTCTTCTCTTGGCTGGATTCTCCAGCCT
TGCAGCGTTGCTTGACTCTGCTGAGAGATAGCAGGCCATGGCAGCGGCTGGTAAGAATAGTTCAGTGGGG
CTGGCTGGAGTTGCCTTGGGTCAAGCAGAATATTAATAGGCAGGGGAATGCACCTGTAGCTAGTGGGCGC
TACTGCCAGCCTGAAGAGGAAGTGGCTCGACTCTTGACCATGGCTGGGGTTCCTGAGGATGAGCTAAACC
CTTTCCATGTACTGGGGGTTGAGGCCACAGCATCAGATGTTGAACTGAAGAAGGCCTATAGACAGCTGGC
AGTGATGGTTCATCCTGACAAAAATCATCATCCCCGGGCTGAGGAGGCCTTCAAGGTTTTGCGAGCAGCT
TGGGACATTGTCAGCAATGCTGAAAAGCGAAAGGAGTATGAGATGAAACGAATGGCAGAGAATGAGCTGA
GCCGGTCAGTAAATGAGTTTCTGTCCAAGCTGCAAGATGACCTCAAGGAGGCAATGAATACTATGATGTG
TAGCCGATGCCAAGGAAAGCATAGGAGGTTTGAAATGGACCGGGAACCTAAGAGTGCCAGATACTGTGCT
GAGTGTAATAGGCTGCATCCTGCTGAGGAAGGAGACTTTTGGGCAGAGTCAAGCATGTTGGGCCTCAAGA
TCACCTACTTTGCACTGATGGATGGAAAGGTGTATGACATCACAGAGTGGGCTGGATGCCAGCGTGTAGG
TATCTCCCCAGATACCCACAGAGTCCCCTATCACATCTCATTTGGTTCTCGGATTCCAGGCACCAGAGGG
CGGCAGAGAGCCACCCCAGATGCCCCTCCTGCTGATCTTCAGGATTTCTTGAGTCGGATCTTTCAAGTAC
CCCCAGGGCAGATGCCCAATGGGAACTTCTTTGCAGCTCCTCAGCCTGCCCCTGGAGCCGCTGCAGCCTC
TAAGCCCAACAGCACAGTACCCAAGGGAGAAGCCAAACCTAAGCGGCGGAAGAAAGTGAGGAGGCCCTTC
CAACGTTGA

Translation (702 aa):
MAQKHPGERGLYGAHHSGGASLRTLGPSVDPEIPSFSGLRDSAGTAPNGTRCLTEHSGPKHTQHPNPAHW
LDPSHGPPGGPGPPRDAEDPDQSETSSEEESGVDQELSKENETGNQKDGNSFLSIPSACNCQGTPGIPEG
PYSEGGNGSSSNFCHHCTSPALGEDELEEEYDDEESLKFPSDFSRVSSGKKPPSRRQRHRFPTKEDTREG
GRRDPRSPGRHRLGRKRSQADKRKGLGLWGAEELCQLGQAGFWWLIELLVLVGEYVETCGHLIYACRQLK
SSDLDLFRVWMGVWTGRLGGWAQVMFQFLSQGFYCGVGLFTRFLKLLGALLLLALALFLGFLQLGWRFLV
GLGDRLGWRDKATWLFSWLDSPALQRCLTLLRDSRPWQRLVRIVQWGWLELPWVKQNINRQGNAPVASGR
YCQPEEEVARLLTMAGVPEDELNPFHVLGVEATASDVELKKAYRQLAVMVHPDKNHHPRAEEAFKVLRAA
WDIVSNAEKRKEYEMKRMAENELSRSVNEFLSKLQDDLKEAMNTMMCSRCQGKHRRFEMDREPKSARYCA
ECNRLHPAEEGDFWAESSMLGLKITYFALMDGKVYDITEWAGCQRVGISPDTHRVPYHISFGSRIPGTRG
RQRATPDAPPADLQDFLSRIFQVPPGQMPNGNFFAAPQPAPGAAAASKPNSTVPKGEAKPKRRKKVRRPF
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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