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Report for CCDS86287.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
86287.1 Public Homo sapiens 12 PYROXD1 24 110 108 CCDS HistoryNCBI Gene:79912Re-query CCDS DB by CCDS ID:86287.1Re-query CCDS DB by GeneID:79912See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 86287.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000538582.5 ENSP00000438505.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000538582.5Link to Ensembl Protein Viewer:ENSP00000438505.1Re-query CCDS DB by Nucleotide ID:ENST00000538582Re-query CCDS DB by Protein ID:ENSP00000438505
Original member Current member NCBI NM_001350912.2 NP_001337841.1 Accepted alive Link to Nucleotide Sequence:NM_001350912.2Link to Protein Sequence:NP_001337841.1Re-query CCDS DB by Nucleotide ID:NM_001350912Re-query CCDS DB by Protein ID:NP_001337841Link to BLAST:NP_001337841.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001337841.1 429 Q8WU10-2 429 100% 0 0

Chromosomal Locations for CCDS 86287.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 21445395 21445466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 21449563 21449691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 21452081 21452154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 21455132 21455292 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 21455995 21456095 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 21461025 21461154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 21462008 21462120 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 21462740 21462862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 21467481 21467618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 21468506 21468754 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1290 nt):
ATGTTAGGAAAACGCTTTCCCAACATTAAGGTTATAGAATCTGGCGTAAAGCAACTGAAGAGTGAAGAAC
ACTGCATTGTAACAGAAGATGGCAATCAGCACGTATATAAGAAACTCTGTCTGTGTGCTGGAGCTAAACC
AAAGTTGATATGTGAAGGAAATCCTTATGTATTAGGAATCCGTGATACAGACAGTGCTCAGGAATTTCAG
AAACAGCTTACTAAAGCTAAAAGAATAATGATCATAGGGAACGGTGGTATTGCACTTGAGTTAGTGTATG
AAATTGAAGGCTGTGAAGTGATTTGGGCCATTAAAGATAAAGCTATAGGGAATACTTTCTTCGATGCAGG
AGCAGCTGAATTCTTGACTTCAAAGCTCATTGCTGAAAAATCAGAGGCTAAAATTGCACATAAAAGAACC
AGATATACAACTGAAGGAAGGAAAAAGGAAGCTAGAAGCAAATCTAAAGCAGATAATGTAGGAAGTGCAT
TGGGACCAGATTGGCATGAAGGCTTGAATCTTAAAGGAACAAAAGAGTTTTCTCATAAGATTCACCTTGA
AACTATGTGTGAAGTAAAGAAAATCTACCTTCAGGATGAGTTTAGAATTTTGAAGAAAAAGTCCTTCACT
TTTCCAAGAGACCATAAGTCAGTTACAGCTGATACAGAGATGTGGCCTGTCTATGTGGAATTGACCAATG
AAAAGATATATGGCTGCGATTTCATTGTCAGTGCTACAGGAGTTACACCAAATGTAGAACCTTTTCTCCA
TGGTAACAGTTTTGATCTAGGAGAAGATGGTGGCCTGAAAGTGGATGATCATATGCACACATCCCTTCCT
GATATCTATGCTGCCGGTGACATCTGTACTACATCCTGGCAGCTGAGCCCAGTCTGGCAGCAGATGAGGC
TGTGGACCCAGGCTAGACAGATGGGATGGTATGCAGCAAAGTGCATGGCTGCAGCGAGTTCAGGAGACTC
TATTGACATGGATTTCAGCTTTGAACTGTTTGCTCATGTGACAAAATTTTTTAACTATAAGGTTGTACTG
CTGGGAAAATACAATGCACAGGGCTTAGGTTCAGATCATGAATTAATGCTGAGATGTACCAAAGGACGAG
AATACATCAAAGTCGTCATGCAAAATGGACGAATGATGGGAGCTGTCTTAATTGGTGAAACCGATTTAGA
AGAAACATTTGAAAACCTAATCTTAAACCAAATGAATCTTTCATCATATGGAGAAGATCTGCTAGATCCA
AATATTGATATAGAAGATTATTTTGACTAA

Translation (429 aa):
MLGKRFPNIKVIESGVKQLKSEEHCIVTEDGNQHVYKKLCLCAGAKPKLICEGNPYVLGIRDTDSAQEFQ
KQLTKAKRIMIIGNGGIALELVYEIEGCEVIWAIKDKAIGNTFFDAGAAEFLTSKLIAEKSEAKIAHKRT
RYTTEGRKKEARSKSKADNVGSALGPDWHEGLNLKGTKEFSHKIHLETMCEVKKIYLQDEFRILKKKSFT
FPRDHKSVTADTEMWPVYVELTNEKIYGCDFIVSATGVTPNVEPFLHGNSFDLGEDGGLKVDDHMHTSLP
DIYAAGDICTTSWQLSPVWQQMRLWTQARQMGWYAAKCMAAASSGDSIDMDFSFELFAHVTKFFNYKVVL
LGKYNAQGLGSDHELMLRCTKGREYIKVVMQNGRMMGAVLIGETDLEETFENLILNQMNLSSYGEDLLDP
NIDIEDYFD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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