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Report for CCDS8477.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8477.1 Public Homo sapiens 11 KCNJ1 24 110 108 CCDS HistoryNCBI Gene:3758Re-query CCDS DB by CCDS ID:8477.1Re-query CCDS DB by GeneID:3758See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8477.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000324036.7 ENSP00000316233.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000324036.7Link to Ensembl Protein Viewer:ENSP00000316233.3Re-query CCDS DB by Nucleotide ID:ENST00000324036Re-query CCDS DB by Protein ID:ENSP00000316233
Original member Current member EBI ENST00000392665.6 ENSP00000376433.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000392665.6Link to Ensembl Protein Viewer:ENSP00000376433.2Re-query CCDS DB by Nucleotide ID:ENST00000392665Re-query CCDS DB by Protein ID:ENSP00000376433
Original member Current member EBI ENST00000392666.6 ENSP00000376434.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000392666.6Link to Ensembl Protein Viewer:ENSP00000376434.1Re-query CCDS DB by Nucleotide ID:ENST00000392666Re-query CCDS DB by Protein ID:ENSP00000376434
Original member Current member EBI ENST00000440599.6 ENSP00000406320.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000440599.6Link to Ensembl Protein Viewer:ENSP00000406320.2Re-query CCDS DB by Nucleotide ID:ENST00000440599Re-query CCDS DB by Protein ID:ENSP00000406320
Original member Current member NCBI NM_153764.3 NP_722448.1 Accepted alive Link to Nucleotide Sequence:NM_153764.3Link to Protein Sequence:NP_722448.1Re-query CCDS DB by Nucleotide ID:NM_153764Re-query CCDS DB by Protein ID:NP_722448Link to BLAST:NP_722448.1
Original member Current member NCBI NM_153766.3 NP_722450.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_153766.3Link to Protein Sequence:NP_722450.1Re-query CCDS DB by Nucleotide ID:NM_153766Re-query CCDS DB by Protein ID:NP_722450Link to BLAST:NP_722450.1
Original member Current member NCBI NM_153767.4 NP_722451.1 Accepted alive Link to Nucleotide Sequence:NM_153767.4Link to Protein Sequence:NP_722451.1Re-query CCDS DB by Nucleotide ID:NM_153767Re-query CCDS DB by Protein ID:NP_722451Link to BLAST:NP_722451.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_722448.1 372 P48048-2 372 100% 0 0
NP_722450.1 372 P48048-2 372 100% 0 0
NP_722451.1 372 P48048-2 372 100% 0 0

Chromosomal Locations for CCDS 8477.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 128839125 128840243 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1119 nt):
ATGTTCAAACATCTTCGGAAATGGGTCGTCACTCGCTTTTTTGGGCATTCTCGGCAAAGAGCAAGGCTAG
TCTCCAAAGATGGAAGGTGCAACATAGAATTTGGCAATGTGGAGGCACAGTCAAGGTTTATATTCTTTGT
GGACATCTGGACAACGGTACTTGACCTCAAGTGGAGATACAAAATGACCATTTTCATCACAGCCTTCTTG
GGGAGTTGGTTTTTCTTTGGTCTCCTGTGGTATGCAGTAGCGTACATTCACAAAGACCTCCCGGAATTCC
ATCCTTCTGCCAATCACACTCCCTGTGTGGAGAATATTAATGGCTTGACCTCAGCTTTTCTGTTTTCTCT
GGAGACTCAAGTGACCATTGGATATGGATTCAGGTGTGTGACAGAACAGTGTGCCACTGCCATTTTTCTG
CTTATCTTTCAGTCTATACTTGGAGTTATAATCAATTCTTTCATGTGTGGGGCCATCTTAGCCAAGATCT
CCAGGCCCAAAAAACGTGCCAAGACCATTACGTTCAGCAAGAACGCAGTGATCAGCAAACGGGGAGGGAA
GCTTTGCCTCCTAATCCGAGTGGCTAATCTCAGGAAGAGCCTTCTTATTGGCAGTCACATTTATGGAAAG
CTTCTGAAGACCACAGTCACTCCTGAAGGAGAGACCATTATTTTGGACCAGATCAATATCAACTTTGTAG
TTGACGCTGGGAATGAAAATTTATTCTTCATCTCCCCATTGACAATTTACCATGTCATTGATCACAACAG
CCCTTTCTTCCACATGGCAGCGGAGACCCTTCTCCAGCAGGACTTTGAATTAGTGGTGTTTTTAGATGGC
ACAGTGGAGTCCACCAGTGCTACCTGCCAAGTCCGGACATCCTATGTCCCAGAGGAGGTGCTTTGGGGCT
ACCGTTTTGCTCCCATAGTATCCAAGACAAAGGAAGGGAAATACCGAGTGGATTTCCATAACTTTAGCAA
GACAGTGGAAGTGGAGACCCCTCACTGTGCCATGTGCCTTTATAATGAGAAAGATGTTAGAGCCAGGATG
AAGAGAGGCTATGACAACCCCAACTTCATCTTGTCAGAAGTCAATGAAACAGATGACACCAAAATGTAA

Translation (372 aa):
MFKHLRKWVVTRFFGHSRQRARLVSKDGRCNIEFGNVEAQSRFIFFVDIWTTVLDLKWRYKMTIFITAFL
GSWFFFGLLWYAVAYIHKDLPEFHPSANHTPCVENINGLTSAFLFSLETQVTIGYGFRCVTEQCATAIFL
LIFQSILGVIINSFMCGAILAKISRPKKRAKTITFSKNAVISKRGGKLCLLIRVANLRKSLLIGSHIYGK
LLKTTVTPEGETIILDQININFVVDAGNENLFFISPLTIYHVIDHNSPFFHMAAETLLQQDFELVVFLDG
TVESTSATCQVRTSYVPEEVLWGYRFAPIVSKTKEGKYRVDFHNFSKTVEVETPHCAMCLYNEKDVRARM
KRGYDNPNFILSEVNETDDTKM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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