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Report for CCDS77194.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
77194.1 Public Homo sapiens 18 SERPINB12 24 110 108 CCDS HistoryNCBI Gene:89777Re-query CCDS DB by CCDS ID:77194.1Re-query CCDS DB by GeneID:89777See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 77194.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000382768.2 ENSP00000372218.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000382768.2Link to Ensembl Protein Viewer:ENSP00000372218.1Re-query CCDS DB by Nucleotide ID:ENST00000382768Re-query CCDS DB by Protein ID:ENSP00000372218
Original member Current member NCBI NM_001307928.2 NP_001294857.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001307928.2Link to Protein Sequence:NP_001294857.1Re-query CCDS DB by Nucleotide ID:NM_001307928Re-query CCDS DB by Protein ID:NP_001294857Link to BLAST:NP_001294857.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001294857.1 425 Q96P63-2 425 100% 0 0

Chromosomal Locations for CCDS 77194.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 18 (NC_000018.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 63556160 63556327 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 63558352 63558486 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 63559578 63559718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 63561085 63561202 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 63563978 63564120 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 63565445 63565612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 63566607 63567011 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1278 nt):
ATGGACTCTCTTGTTACAGCAAACACCAAATTTTGCTTTGATCTTTTTCAAGAGATAGGCAAAGATGATC
GTCATAAAAACATATTTTTCTCTCCCCTGAGCCTCTCAGCTGCCCTTGGTATGGTACGCTTGGGTGCTAG
AAGTGACAGTGCACATCAGATTGATGAGGTACTACACTTCAACGAATTTTCCCAGAATGAAAGCAAAGAA
CCTGACCCTTGTCTGAAAAGCAACAAACAAAAAGTGCTGGCTGACAGCTCTCTGGAGGGGCAGAAAAAAA
CGACAGAGCCTCTGGATCAGCAGGCTGGGTCCTTAAACAATGAGAGCGGACTGGTCAGCTGCTACTTTGG
GCAGCTTCTCTCCAAATTAGACAGGATCAAGACTGATTACACACTGAGTATTGCCAACAGGCTTTATGGA
GAGCAGGAATTCCCAATCTGTCAGGAATACTTAGATGGTGTGATTCAATTTTACCACACGACGATTGAAA
GTGTTGATTTCCAAAAAAACCCTGAAAAATCCAGACAAGAGATTAACTTCTGGGTTGAATGTCAATCCCA
AGGTAAAATCAAGGAACTCTTCAGCAAGGACGCTATTAATGCTGAGACTGTGCTGGTACTGGTGAATGCT
GTTTACTTCAAGGCCAAATGGGAAACATACTTTGACCATGAAAACACGGTGGATGCACCTTTCTGTCTAA
ATGCGAATGAAAACAAGAGTGTGAAGATGATGACGCAAAAAGGCCTCTACAGAATTGGCTTCATAGAGGA
GGTGAAGGCACAGATCCTGGAAATGAGGTACACCAAGGGGAAGCTCAGCATGTTCGTGCTGCTGCCATCT
CACTCTAAAGATAACCTGAAGGGTCTGGAAGAGCTTGAAAGGAAAATCACCTATGAAAAAATGGTGGCCT
GGAGCAGCTCAGAAAACATGTCAGAAGAATCGGTGGTCCTGTCCTTCCCCCGGTTCACCCTGGAAGACAG
CTATGATCTCAATTCCATTTTACAAGACATGGGCATTACGGATATCTTTGATGAAACGAGGGCTGATCTT
ACTGGAATCTCTCCAAGTCCCAATTTGTACTTGTCAAAAATTATCCACAAAACCTTTGTGGAGGTGGATG
AAAACGGTACCCAGGCAGCTGCAGCCACTGGGGCTGTTGTCTCGGAAAGGTCACTACGATCTTGGGTGGA
GTTTAATGCCAACCACCCTTTTCTCTTTTTCATTAGACACAACAAAACCCAAACCATTCTCTTTTATGGC
AGGGTCTGCTCTCCTTAA

Translation (425 aa):
MDSLVTANTKFCFDLFQEIGKDDRHKNIFFSPLSLSAALGMVRLGARSDSAHQIDEVLHFNEFSQNESKE
PDPCLKSNKQKVLADSSLEGQKKTTEPLDQQAGSLNNESGLVSCYFGQLLSKLDRIKTDYTLSIANRLYG
EQEFPICQEYLDGVIQFYHTTIESVDFQKNPEKSRQEINFWVECQSQGKIKELFSKDAINAETVLVLVNA
VYFKAKWETYFDHENTVDAPFCLNANENKSVKMMTQKGLYRIGFIEEVKAQILEMRYTKGKLSMFVLLPS
HSKDNLKGLEELERKITYEKMVAWSSSENMSEESVVLSFPRFTLEDSYDLNSILQDMGITDIFDETRADL
TGISPSPNLYLSKIIHKTFVEVDENGTQAAAATGAVVSERSLRSWVEFNANHPFLFFIRHNKTQTILFYG
RVCSP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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