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Report for CCDS75943.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75943.1 Public Homo sapiens XY GTPBP6 24 110 108 CCDS HistoryNCBI Gene:8225Re-query CCDS DB by CCDS ID:75943.1Re-query CCDS DB by GeneID:8225See the combined annotation on chromosome X in Sequence ViewerSee the combined annotation on chromosome Y in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 75943.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000326153.10 ENSP00000316598.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000326153.10Link to Ensembl Protein Viewer:ENSP00000316598.5Re-query CCDS DB by Nucleotide ID:ENST00000326153Re-query CCDS DB by Protein ID:ENSP00000316598
Original member Current member NCBI NM_012227.4 NP_036359.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_012227.4Link to Protein Sequence:NP_036359.3Re-query CCDS DB by Nucleotide ID:NM_012227Re-query CCDS DB by Protein ID:NP_036359Link to BLAST:NP_036359.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036359.3 516 O43824 516 100% 0 0

Chromosomal Locations for CCDS 75943.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11) On '-' strand of Chromosome Y (NC_000024.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome YSee the combined annotation on chromosome Y in Sequence Viewer

Chromosome Start Stop Links
X 305074 305197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 307360 307512 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 307732 307880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 311419 311627 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 312766 312924 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 314150 314217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 314890 315020 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 315229 315299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 316914 317051 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 318439 318787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

Chromosome Start Stop Links
Y 305074 305197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 307360 307512 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 307732 307880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 311419 311627 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 312766 312924 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 314150 314217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 314890 315020 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 315229 315299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 316914 317051 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 318439 318787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1551 nt):
ATGTGGGCCCTGCGGGCCGCCGTACGCCCGGGGCTGCGGCTCTCCCGCGTGGGCCGCGGCCGCTCGGCTC
CGCGGGCAGCCGCGCCGTCCTGCCCCGCGCGCGCGCTAGCCGCTGTCGGCCGCAGGAGCCCCGGGAATCT
GGAGGGGCCGTGGGGCGGAGGGCGGGGCCTGCGGGCGGACGGCGGCCGAAGCCGCACGGGAGACGACGAG
GAGGAGCCGGAAGATGCGGACGAGAACGCCGAGGAGGAGCTGCTGCGGGGAGAGCCTCTGCTGCCGGCGG
GGACCCAGCGCGTGTGTCTGGTTCACCCTGACGTCAAGTGGGGCCCGGGGAAGTCGCAGATGACTCGAGC
CGAGTGGCAGGTGGCGGAGGCCACAGCGCTGGTGCACACGCTGGACGGCTGGTCCGTGGTGCAGACAATG
GTCGTGTCCACCAAAACGCCGGACAGGAAGCTCATCTTTGGCAAAGGGAACTTTGAGCACCTGACAGAAA
AGATCCGAGGGTCTCCAGACATCACGTGCGTCTTCCTGAACGTGGAGAGGATGGCTGCCCCGACCAAGAA
AGAACTGGAAGCCGCCTGGGGCGTGGAGGTGTTTGACCGCTTCACGGTCGTCCTGCACATCTTCCGCTGT
AACGCCCGCACGAAGGAGGCCCGGCTTCAGGTGGCCCTGGCGGAGATGCCGCTGCACAGGTCGAACTTGA
AAAGGGACGTCGCCCACCTGTACCGAGGAGTCGGCTCGCGCTACATCATGGGGTCAGGAGAATCCTTCAT
GCAGCTGCAGCAGCGTCTCCTGAGAGAGAAGGAGGCCAAGATCAGGAAGGCCTTGGACAGGCTTCGCAAG
AAGAGGCACCTGCTCCGCCGGCAGCGGACGAGGCGGGAGTTCCCCGTGATCTCCGTGGTGGGGTACACCA
ACTGCGGAAAGACCACGCTGATCAAGGCACTGACGGGCGATGCCGCCATCCAGCCACGGGACCAGCTGTT
TGCCACGCTGGACGTCACGGCCCACGCGGGCACGCTGCCCTCACGCATGACCGTCCTGTACGTGGACACC
ATCGGCTTCCTCTCCCAGCTGCCGCACGGCCTCATCGAGTCCTTCTCCGCCACCCTGGAAGACGTGGCCC
ACTCGGATCTCATCTTGCACGTGAGGGACGTCAGCCACCCCGAGGCGGAGCTCCAGAAATGCAGCGTTCT
GTCCACGCTGCGTGGCCTGCAGCTGCCCGCCCCGCTCCTGGACTCCATGGTGGAGGTTCACAACAAGGTG
GACCTCGTGCCCGGGTACAGCCCCACGGAACCGAACGTCGTGCCCGTGTCTGCCCTGCGGGGCCACGGGC
TCCAGGAGCTGAAAGCTGAGCTCGATGCGGCGGTTTTGAAGGCGACGGGGAGACAGATCCTCACTCTCCG
TGTGAGGCTCGCAGGGGCGCAGCTCAGCTGGCTGTATAAGGAGGCCACAGTTCAGGAGGTGGACGTGATC
CCTGAGGACGGGGCGGCCGACGTGAGGGTCATCATCAGCAACTCAGCCTACGGCAAATTCCGGAAGCTCT
TTCCAGGATGA

Translation (516 aa):
MWALRAAVRPGLRLSRVGRGRSAPRAAAPSCPARALAAVGRRSPGNLEGPWGGGRGLRADGGRSRTGDDE
EEPEDADENAEEELLRGEPLLPAGTQRVCLVHPDVKWGPGKSQMTRAEWQVAEATALVHTLDGWSVVQTM
VVSTKTPDRKLIFGKGNFEHLTEKIRGSPDITCVFLNVERMAAPTKKELEAAWGVEVFDRFTVVLHIFRC
NARTKEARLQVALAEMPLHRSNLKRDVAHLYRGVGSRYIMGSGESFMQLQQRLLREKEAKIRKALDRLRK
KRHLLRRQRTRREFPVISVVGYTNCGKTTLIKALTGDAAIQPRDQLFATLDVTAHAGTLPSRMTVLYVDT
IGFLSQLPHGLIESFSATLEDVAHSDLILHVRDVSHPEAELQKCSVLSTLRGLQLPAPLLDSMVEVHNKV
DLVPGYSPTEPNVVPVSALRGHGLQELKAELDAAVLKATGRQILTLRVRLAGAQLSWLYKEATVQEVDVI
PEDGAADVRVIISNSAYGKFRKLFPG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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