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Report for CCDS75389.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75389.1 Public Homo sapiens 6 SLC22A23 24 110 108 CCDS HistoryNCBI Gene:63027Re-query CCDS DB by CCDS ID:75389.1Re-query CCDS DB by GeneID:63027See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 75389.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000380298.2 ENSP00000369653.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000380298.2Link to Ensembl Protein Viewer:ENSP00000369653.2Re-query CCDS DB by Nucleotide ID:ENST00000380298Re-query CCDS DB by Protein ID:ENSP00000369653
Original member Current member NCBI NM_001286456.2 NP_001273385.1 Accepted alive Link to Nucleotide Sequence:NM_001286456.2Link to Protein Sequence:NP_001273385.1Re-query CCDS DB by Nucleotide ID:NM_001286456Re-query CCDS DB by Protein ID:NP_001273385Link to BLAST:NP_001273385.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001273385.1 361 A1A5C7-4 361 100% 0 0

Chromosomal Locations for CCDS 75389.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 3323830 3324002 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 3410188 3410342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 3415752 3415855 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 3455906 3456559 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1086 nt):
ATGGCCATAGACCGGCGGCGCGAGGCGGCGGGCGGCGGGCCTGGGCGGCAGCCGGCCCCGGCCGAGGAGA
ACGGCTCCCTGCCGCCCGGGGACGCGGCGGCCTCGGCGCCCCTCGGGGGACGCGCGGGCCCCGGCGGCGG
CGCGGAGATCCAGCCGCTGCCCCCACTGCATCCTGGAGGCGGCCCGCACCCGAGCTGCTGCTCCGCGGCT
GCGGCCCCGAGCCTCTTGTTGCTGGACTATGACGGGTCGGTGCTGCCCTTCCTCGGGGGCCTGGGCGGGG
GCTATCAGAAGACCCTCGTGCTGCTCACCTGGATCCCGGCGCTGTTCATCGGCTTCAGCCAGTTCTCGGA
CTCGTTCCTCCTGGACCAGCCCAACTTCTGGTGCCGCGGGGCCGGCAAAGGCACCGAGCTGGCAGGGGTC
ACCACCACAGGCCGGGGCGGGGACATGGGCAACTGGACCAGCCTCCCCACCACCCCCTTCGCCACTGCCC
CCTGGGAGGCTGCGGGCAACCGGAGCAACAGCAGCGGCGCGGACGGAGGCGACACACCACCCCTGCCATC
CCCTCCGGACAAGGGGGACAACGCCTCCAACTGTGACTGCCGCGCATGGGACTACGGCATCCGCGCCGGC
CTCGTCCAGAACGTGGTCAGCAAGTGGGATCTTGTGTGTGATAATGCCTGGAAGGTCCATATCGCTAAGT
TCTCCTTACTGGTTGGATTAATCTTTGGCTACCTAATAACTGGATGCATTGCTGACTGGGTCGGCCGGCG
GCCTGTGCTGCTGTTTTCCATCATCTTCATTCTGATCTTTGGACTGACTGTGGCACTGTCAGTGAATGTG
ACAATGTTCAGCACACTCAGGTTCTTTGAAGGATTTTGCCTGGCTGGAATCATTCTCACCTTGTATGCTT
TACGAATAGAGCTGTGCCCCCCTGGAAAACGGTTCATGATTACGATGGTGGCGAGCTTCGTGGCCATGGC
GGGCCAGTTCCTCATGCCTGGGCTAGCCGCCCTGTGCCGGGATTGGCAGGTGCTGCAGGCCCTCATCATC
TGCCCCTTCCTGCTCATGCTGCTCTACTGGTCGTGA

Translation (361 aa):
MAIDRRREAAGGGPGRQPAPAEENGSLPPGDAAASAPLGGRAGPGGGAEIQPLPPLHPGGGPHPSCCSAA
AAPSLLLLDYDGSVLPFLGGLGGGYQKTLVLLTWIPALFIGFSQFSDSFLLDQPNFWCRGAGKGTELAGV
TTTGRGGDMGNWTSLPTTPFATAPWEAAGNRSNSSGADGGDTPPLPSPPDKGDNASNCDCRAWDYGIRAG
LVQNVVSKWDLVCDNAWKVHIAKFSLLVGLIFGYLITGCIADWVGRRPVLLFSIIFILIFGLTVALSVNV
TMFSTLRFFEGFCLAGIILTLYALRIELCPPGKRFMITMVASFVAMAGQFLMPGLAALCRDWQVLQALII
CPFLLMLLYWS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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