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Report for CCDS74736.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
74736.1 Public Homo sapiens 20 ZNF334 24 110 108 CCDS HistoryNCBI Gene:55713Re-query CCDS DB by CCDS ID:74736.1Re-query CCDS DB by GeneID:55713See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 74736.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000615481.4 ENSP00000484362.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000615481.4Link to Ensembl Protein Viewer:ENSP00000484362.1Re-query CCDS DB by Nucleotide ID:ENST00000615481Re-query CCDS DB by Protein ID:ENSP00000484362
Original member Current member EBI ENST00000625284.2 ENSP00000485779.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000625284.2Link to Ensembl Protein Viewer:ENSP00000485779.1Re-query CCDS DB by Nucleotide ID:ENST00000625284Re-query CCDS DB by Protein ID:ENSP00000485779
Original member Current member NCBI NM_001270497.3 NP_001257426.1 Accepted alive Link to Nucleotide Sequence:NM_001270497.3Link to Protein Sequence:NP_001257426.1Re-query CCDS DB by Nucleotide ID:NM_001270497Re-query CCDS DB by Protein ID:NP_001257426Link to BLAST:NP_001257426.1
Original member Current member NCBI NM_001353821.2 NP_001340750.1 Accepted alive Link to Nucleotide Sequence:NM_001353821.2Link to Protein Sequence:NP_001340750.1Re-query CCDS DB by Nucleotide ID:NM_001353821Re-query CCDS DB by Protein ID:NP_001340750Link to BLAST:NP_001340750.1
Original member Current member NCBI NM_001353822.2 NP_001340751.1 Accepted alive Link to Nucleotide Sequence:NM_001353822.2Link to Protein Sequence:NP_001340751.1Re-query CCDS DB by Nucleotide ID:NM_001353822Re-query CCDS DB by Protein ID:NP_001340751Link to BLAST:NP_001340751.1
Original member Current member NCBI NM_001353823.2 NP_001340752.1 Accepted alive Link to Nucleotide Sequence:NM_001353823.2Link to Protein Sequence:NP_001340752.1Re-query CCDS DB by Nucleotide ID:NM_001353823Re-query CCDS DB by Protein ID:NP_001340752Link to BLAST:NP_001340752.1

Chromosomal Locations for CCDS 74736.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 46501296 46503097 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 46504214 46504306 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 46504614 46504740 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 46509605 46509622 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2040 nt):
ATGGAAAATGAGAAGGAGATACCAGTTTCATTCCAGGACCTGACTGTGAACTTCACCCAAGAGGAATGGC
AGCAACTGGACCCTGCTCAGAGGCTCCTGTACAGGGATGTGATGCTGGAGAACTACAGCAACTTGGTCTC
TGTGGGGTATCATGTTAGCAAACCAGATGTGATTTTCAAATTGGAGCAAGGAGAAGAGCCATGGATAGTG
GAGGAATTCTCAAATCAGAACTACCCAGACATTGATGATGCCTTAGAGAAGAACAAGGAAATCCAAGATA
AACATTTGACACAAACTGTATTCTTCAGCAACAAAACACTGATTACAGAAAGAGAGAATGTATTTGGGAA
AACACTTAATCTGGGCATGAATAGTGTTCCCTCAAGAAAAATGCCCTATAAATGTAATCCAGGAGGAAAC
AGTTTGAAAACTAATTCAGAAGTAATTGTTGCAAAGAAAAGCAAAGAAAACAGAAAGATTCCTGATGGAT
ACAGTGGATTTGGGAAGCATGAGAAAAGTCATTTGGGAATGAAAAAATACAGATACAATCCAATGAGGAA
AGCCAGCAATCAAAACGAAAATCTTATTCTGCACCAGAACATTCAGATTTTGAAACAACCGTTTGACTAT
AATAAATGTGGGAAAACCTTCTTCAAGAGGGCAATTCTCATTACACAAAAGGGGAGACAGACTGAAAGGA
AACCAAATGAATGTAATGAATGTAGGAAAACCTTTTCTAAGAGATCTACCCTCATTGTACATCAGAGAAT
TCATACAGGGGAGAAACCGTATGTTTGTAGTGATTGTAGGAAAACTTTTCGTGTGAAGACAAGCCTCACT
CGACACCGAAGAATTCATACTGGAGAGAGACCCTATGAATGCAGTGAATGCAGGAAAACCTTCATTGACA
AATCTGCCCTTATTGTACACCAGAAAATTCATGGAGGGGAGAAATCCTATGAGTGTAATGAATGTGGAAA
GACCTTTTTTCGGAAGTCAGCCCTGGCTGAACATTTCAGGTCACACACAGGGGAGAAGCCTTACGAATGC
AAGGAATGTGGAAATGCCTTCAGCAAGAAATCGTATCTTGTTGTACATCAAAGAACTCACAGAGGAGAGA
AGCCAAATGAATGTAAGGAATGTGGGAAAACCTTCTTCTGTCAGTCAGCCCTTACTGCGCATCAGAGAAT
TCACACAGGGGAAAAACCCTATGAATGTAGTGAATGTGAGAAAACCTTCTTTTGTCAATCTGCCCTCAAT
GTGCATCGAAGAAGTCATACAGGAGAGAAGCCCTATGAATGCAGTCAATGTGGAAAATTTTTATGTACGA
AATCAGCCCTCATTGCACATCAGATAACTCATAGAGGAAAGAAGTCTTATGAATGTAATGAATGTGGGAA
ATTTTTCTGCCATAAGTCAACACTCACTATACATCAGAGAACACACACAGGAGAGAAACATGGTGTGTTT
AATAAATGTGGTAGAATCTCCATTGTGAAGTCAAACTGCAGTCAGTGTAAGAGAATGAACACAAAGGAGA
ATCTTTATGAGTGTAGTGAACATGGGCATGCCGTCAGCAAAAACTCACACCTCATTGTACATCAGAGAAC
TATATGGGAGAGACCATATGAATGCAATGAATGTGGGAGAACCTACTGCAGGAAGTCAGCCCTGACTCAC
CATCAGAGAACACACACAGGACAGAGACCCTATGAGTGTAATGAATGTGGGAAAACCTTCTGTCAGAAGT
TCTCCTTTGTTGAACATCAGCGAACTCACACTGGGGAGAAACCATATGAATGTAATGAATGTGGGAAATC
CTTCTGCCATAAGTCAGCCTTCAGAGTCCATAGAAGAATTCACACAGGAGAGAAACCATATGAATGTAAT
CAATGTGGGAAAACCTACCGTCGCCTGTGGACTCTCACTGAACATCAGAAAATACACACAGGAGAGAAAC
CTTATGAATGTAACAAATGTGAGAAAACATTTCGCCACAAATCAAACTTTCTTTTACATCAGAAATCCCA
CAAGGAATAA

Translation (679 aa):
MENEKEIPVSFQDLTVNFTQEEWQQLDPAQRLLYRDVMLENYSNLVSVGYHVSKPDVIFKLEQGEEPWIV
EEFSNQNYPDIDDALEKNKEIQDKHLTQTVFFSNKTLITERENVFGKTLNLGMNSVPSRKMPYKCNPGGN
SLKTNSEVIVAKKSKENRKIPDGYSGFGKHEKSHLGMKKYRYNPMRKASNQNENLILHQNIQILKQPFDY
NKCGKTFFKRAILITQKGRQTERKPNECNECRKTFSKRSTLIVHQRIHTGEKPYVCSDCRKTFRVKTSLT
RHRRIHTGERPYECSECRKTFIDKSALIVHQKIHGGEKSYECNECGKTFFRKSALAEHFRSHTGEKPYEC
KECGNAFSKKSYLVVHQRTHRGEKPNECKECGKTFFCQSALTAHQRIHTGEKPYECSECEKTFFCQSALN
VHRRSHTGEKPYECSQCGKFLCTKSALIAHQITHRGKKSYECNECGKFFCHKSTLTIHQRTHTGEKHGVF
NKCGRISIVKSNCSQCKRMNTKENLYECSEHGHAVSKNSHLIVHQRTIWERPYECNECGRTYCRKSALTH
HQRTHTGQRPYECNECGKTFCQKFSFVEHQRTHTGEKPYECNECGKSFCHKSAFRVHRRIHTGEKPYECN
QCGKTYRRLWTLTEHQKIHTGEKPYECNKCEKTFRHKSNFLLHQKSHKE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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