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Report for CCDS73739.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73739.1 Public Homo sapiens 15 PLEKHO2 24 110 108 CCDS HistoryNCBI Gene:80301Re-query CCDS DB by CCDS ID:73739.1Re-query CCDS DB by GeneID:80301See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 73739.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000616065.4 ENSP00000483505.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000616065.4Link to Ensembl Protein Viewer:ENSP00000483505.1Re-query CCDS DB by Nucleotide ID:ENST00000616065Re-query CCDS DB by Protein ID:ENSP00000483505
Original member Current member NCBI NM_001195059.2 NP_001181988.1 Accepted alive Link to Nucleotide Sequence:NM_001195059.2Link to Protein Sequence:NP_001181988.1Re-query CCDS DB by Nucleotide ID:NM_001195059Re-query CCDS DB by Protein ID:NP_001181988Link to BLAST:NP_001181988.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001181988.1 440 Q8TD55-2 440 100% 0 0

Chromosomal Locations for CCDS 73739.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 64842017 64842028 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 64854921 64855037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 64859894 64859998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 64861477 64861575 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 64864899 64865888 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1323 nt):
ATGGAGGAGGAGGATGATCAGAAGTGTGTGGAGACTGTGGAGCTGGGCAGCTATGAGAAGTGCCAGGACC
TTCGTGCCCTCCTCAAGCGAAAACACCGCTTTATCCTGCTGCGATCCCCAGGGAACAAGGTCAGCGACAT
CAAATTCCAGGCACCCACCGGGGAGGAGAAGGAATCCTGGATCAAAGCCCTCAATGAAGGGATTAACCGA
GGCAAAAACAAGGCTTTCGATGAGGTAAAGGTGGACAAGAGCTGCGCCCTGGAGCATGTGACACGGGACC
GGGTGCGAGGGGGCCAGCGACGCCGGCCACCAACGAGAGTCCACCTGAAGGAGGTGGCCAGTGCAGCTTC
TGACGGTCTTCTGCGCCTGGATCTTGATGTTCCGGACAGTGGGCCACCAGTGTTTGCCCCCAGCAATCAT
GTCAGTGAAGCCCAACCTCGGGAGACACCCCGGCCCCTCATGCCTCCTACCAAGCCTTTCCTAGCACCTG
AGACCACCAGCCCTGGTGACAGGGTGGAGACCCCTGTGGGGGAGAGAGCCCCAACCCCTGTCTCAGCAAG
CTCTGAGGTCTCCCCTGAGAGCCAAGAGGACTCAGAGACCCCAGCAGAGGAGGACAGTGGCTCTGAGCAG
CCTCCCAACAGCGTCCTGCCTGACAAACTGAAGGTGAGCTGGGAGAACCCCAGCCCCCAGGAGGCCCCTG
CTGCAGAGAGTGCAGAACCGTCCCAGGCACCCTGTTCTGAGACTTCTGAGGCTGCCCCCAGGGAGGGTGG
GAAGCCCCCTACACCCCCACCCAAGATCTTATCAGAGAAACTGAAAGCCTCCATGGGTGAGATGCAGGCT
TCTGGGCCACCTGCTCCAGGCACAGTGCAGGTCTCAGTGAATGGCATGGATGACAGTCCTGAGCCTGCCA
AGCCCTCTCAGGCTGAGGGCACCCCAGGAACTCCTCCAAAGGATGCAACAACATCCACAGCACTGCCCCC
CTGGGACCTGCCACCTCAGTTCCATCCCCGCTGCTCCTCCCTTGGGGACTTGCTTGGGGAAGGCCCGCGG
CATCCCTTGCAGCCCAGGGAACGGCTATATCGGGCCCAGCTGGAGGTGAAGGTGGCCTCGGAACAGACGG
AGAAACTGTTGAACAAGGTGCTGGGCAGTGAGCCGGCCCCTGTTAGTGCCGAAACATTGCTCAGCCAGGC
TGTGGAGCAGCTGAGGCAGGCCACCCAGGTCCTGCAGGAAATGAGAGATTTGGGAGAGCTGAGCCAGGAA
GCACCTGGGCTAAGGGAGAAGCGGAAGGAGCTGGTGACCCTCTACAGGAGAAGTGCACCCTAG

Translation (440 aa):
MEEEDDQKCVETVELGSYEKCQDLRALLKRKHRFILLRSPGNKVSDIKFQAPTGEEKESWIKALNEGINR
GKNKAFDEVKVDKSCALEHVTRDRVRGGQRRRPPTRVHLKEVASAASDGLLRLDLDVPDSGPPVFAPSNH
VSEAQPRETPRPLMPPTKPFLAPETTSPGDRVETPVGERAPTPVSASSEVSPESQEDSETPAEEDSGSEQ
PPNSVLPDKLKVSWENPSPQEAPAAESAEPSQAPCSETSEAAPREGGKPPTPPPKILSEKLKASMGEMQA
SGPPAPGTVQVSVNGMDDSPEPAKPSQAEGTPGTPPKDATTSTALPPWDLPPQFHPRCSSLGDLLGEGPR
HPLQPRERLYRAQLEVKVASEQTEKLLNKVLGSEPAPVSAETLLSQAVEQLRQATQVLQEMRDLGELSQE
APGLREKRKELVTLYRRSAP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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