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Report for CCDS72983.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
72983.1 Public Homo sapiens 1 C1orf105 24 110 108 CCDS HistoryNCBI Gene:92346Re-query CCDS DB by CCDS ID:72983.1Re-query CCDS DB by GeneID:92346See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 72983.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000367725.4 ENSP00000356698.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000367725.4Link to Ensembl Protein Viewer:ENSP00000356698.4Re-query CCDS DB by Nucleotide ID:ENST00000367725Re-query CCDS DB by Protein ID:ENSP00000356698
Original member Current member NCBI NM_001300760.1 NP_001287689.1 Accepted alive Link to Nucleotide Sequence:NM_001300760.1Link to Protein Sequence:NP_001287689.1Re-query CCDS DB by Nucleotide ID:NM_001300760Re-query CCDS DB by Protein ID:NP_001287689Link to BLAST:NP_001287689.1

Chromosomal Locations for CCDS 72983.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 172453022 172453189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172456415 172456489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172462178 172462245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172465299 172465363 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172468449 172468594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (522 nt):
ATGGAGGAAATGAGGCCTGCAGGACATGGCGTCTCAAATGTTTGCGTCGCCTTTAAAGTAGCCTGTCACA
GCTGCCTTCCACGACTCTTCAATGCCCTCATCCCTTCTCCAGATAGAAATGGAGCAGCTCTTCTTGGAGG
CCAGGCTTCAGCTGATAGCAAGTCTGAGGCCAGGAGGAACCAGTGTGACTCCATGCTGCTCAGAAACCAA
CAGCTGTGCTCCACATGTCAAGAAATGAAAATGGTACAACCAAGAACAATGAAAATCCCAGATGATCCAA
AAGCATCCTTTGAGAATTGTATGAGTTATAGAATGAGTCTTCATCAACCCAAATTCCAGACTACACCTGA
GCCTTTCCATGATGACATCCCAACAGAAAGCATTCACTACAGACTGCCCATTCTGGGCCCCAGGACAGCT
GTCTTCCACGGATTACTGACAGAGGCCTACAAAACTCTAAAAGAGAGACAACGTTCTTCCTTGCCCAGAA
AGGAACCAATAGGCAAGACAACGAGGCAGTGA

Translation (173 aa):
MEEMRPAGHGVSNVCVAFKVACHSCLPRLFNALIPSPDRNGAALLGGQASADSKSEARRNQCDSMLLRNQ
QLCSTCQEMKMVQPRTMKIPDDPKASFENCMSYRMSLHQPKFQTTPEPFHDDIPTESIHYRLPILGPRTA
VFHGLLTEAYKTLKERQRSSLPRKEPIGKTTRQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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