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Report for CCDS65176.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
65176.1 Public Homo sapiens 9 GBGT1 24 110 108 CCDS HistoryNCBI Gene:26301Re-query CCDS DB by CCDS ID:65176.1Re-query CCDS DB by GeneID:26301See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 65176.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000372043.7 ENSP00000361113.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000372043.7Link to Ensembl Protein Viewer:ENSP00000361113.3Re-query CCDS DB by Nucleotide ID:ENST00000372043Re-query CCDS DB by Protein ID:ENSP00000361113
Original member Current member NCBI NM_001282629.2 NP_001269558.1 Accepted alive Link to Nucleotide Sequence:NM_001282629.2Link to Protein Sequence:NP_001269558.1Re-query CCDS DB by Nucleotide ID:NM_001282629Re-query CCDS DB by Protein ID:NP_001269558Link to BLAST:NP_001269558.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001269558.1 294 Q8N5D6-2 294 100% 0 0

Chromosomal Locations for CCDS 65176.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 133153717 133154242 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 133155178 133155312 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 133155901 133155936 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 133156015 133156065 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 133161467 133161532 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 133162342 133162412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (885 nt):
ATGCATCGCCGGAGACTGGCCCTGGGTCTGGGGTTCTGCCTGTTGGCGGGCACAAGCCTCAGTGTCCTGT
GGGTGTATCTTGAGAACTGGCTGCCAGTCTCCTATGTCCCCTATTATCTCCCCTGCCCAGAGATCTTCAA
CATGAAGCTGCACTACAAGAGGGAGAAGCCACTCCAGCCCGTGGTATGGTCACAGTACCCTCAGCCCAAG
CTGCTGGAGCACAGGCCCACACAGCTGCTGACACTCACACCCTGGTTGGCGCCCATCGTCTCCGAGGGAA
CCTTCAACCCAGAGCTTCTGCAGCACATCTACCAGCCACTGAACCTGACCATTGGGGTCACGGTGTTTGC
CGTGGGGAATCCTTCCTGGAGTCAGCCGAGGAGTTCTTCATGCGTGGGTACCGGGTGCACTACTACATCT
TCACTGACAACCCTGCAGCCGTTCCCGGGGTCCCGCTGGGTCCCCACCGGCTTCTCAGCTCCATCCCCAT
CCAGGGTCACTCCCACTGGGAGGAGACATCCATGCGCCGGATGGAGACCATCAGCCAGCACATTGCTAAG
AGGGCTCACCGGGAGGTGGACTACCTCTTCTGCCTTGATGTGGACATGGTGTTTCGGAACCCGTGGGGCC
CTGAGACCTTGGGAGACCTGGTGGCTGCCATTCACCCAAGCTACTACGCCGTTCCCCGCCAGCAGTTCCC
CTATGAGCGCAGGCGTGTTTCCACTGCCTTTGTGGCAGACAGCGAAGGGGACTTCTATTATGGTGGGGCA
GTCTTCGGGGGGCAGGTGGCCAGGGTATATGAGTTTACTAGGGGCTGCCACATGGCCATCCTGGCGGACA
AGGCCAATGGCATCATGGCTGCCTGGCGGGAGGAAAGCCACCTGA

Translation (294 aa):
MHRRRLALGLGFCLLAGTSLSVLWVYLENWLPVSYVPYYLPCPEIFNMKLHYKREKPLQPVVWSQYPQPK
LLEHRPTQLLTLTPWLAPIVSEGTFNPELLQHIYQPLNLTIGVTVFAVGNPSWSQPRSSSCVGTGCTTTS
SLTTLQPFPGSRWVPTGFSAPSPSRVTPTGRRHPCAGWRPSASTLLRGLTGRWTTSSALMWTWCFGTRGA
LRPWETWWLPFTQATTPFPASSSPMSAGVFPLPLWQTAKGTSIMVGQSSGGRWPGYMSLLGAATWPSWRT
RPMASWLPGGRKAT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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