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Report for CCDS59367.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59367.1 Public Homo sapiens 19 ZNF43 24 110 108 CCDS HistoryNCBI Gene:7594Re-query CCDS DB by CCDS ID:59367.1Re-query CCDS DB by GeneID:7594See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 12, NCBI annotation release 104, Ensembl annotation release 71

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59367.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000594012.5 ENSP00000469578.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000594012.5Link to Ensembl Protein Viewer:ENSP00000469578.1Re-query CCDS DB by Nucleotide ID:ENST00000594012Re-query CCDS DB by Protein ID:ENSP00000469578
Original member Current member EBI ENST00000595461.5 ENSP00000469645.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000595461.5Link to Ensembl Protein Viewer:ENSP00000469645.1Re-query CCDS DB by Nucleotide ID:ENST00000595461Re-query CCDS DB by Protein ID:ENSP00000469645
Original member Current member EBI ENST00000598381.5 ENSP00000470275.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000598381.5Link to Ensembl Protein Viewer:ENSP00000470275.1Re-query CCDS DB by Nucleotide ID:ENST00000598381Re-query CCDS DB by Protein ID:ENSP00000470275
Original member Current member NCBI NM_001256648.2 NP_001243577.1 Accepted alive Link to Nucleotide Sequence:NM_001256648.2Link to Protein Sequence:NP_001243577.1Re-query CCDS DB by Nucleotide ID:NM_001256648Re-query CCDS DB by Protein ID:NP_001243577Link to BLAST:NP_001243577.1
Original member Current member NCBI NM_001256649.2 NP_001243578.1 Accepted alive Link to Nucleotide Sequence:NM_001256649.2Link to Protein Sequence:NP_001243578.1Re-query CCDS DB by Nucleotide ID:NM_001256649Re-query CCDS DB by Protein ID:NP_001243578Link to BLAST:NP_001243578.1
Original member Current member NCBI NM_001256650.2 NP_001243579.1 Accepted alive Link to Nucleotide Sequence:NM_001256650.2Link to Protein Sequence:NP_001243579.1Re-query CCDS DB by Nucleotide ID:NM_001256650Re-query CCDS DB by Protein ID:NP_001243579Link to BLAST:NP_001243579.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001243577.1 803 P17038-2 803 100% 0 0
NP_001243578.1 803 P17038-2 803 100% 0 0
NP_001243579.1 803 P17038-2 803 100% 0 0

Chromosomal Locations for CCDS 59367.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 21807607 21809807 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 21817888 21817986 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 21819095 21819206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2412 nt):
ATGGATGTGGCCATAGAATTCTGTCTGGAGGAGTGGCAATGCCTGGACATTGCACAGCAGAATTTATATA
GGAATGTGATGTTAGAGAACTACAGAAACCTGGTCTTCCTGGGTATTGCTGTCTCTAAGCCAGACCTGAT
CACCTGTCTGGAGCAAGAAAAAGAGCCTTGGGAGCCTATGAGGAGACATGAAATGGTAGCCAAACCCCCA
GTTATGTGTTCTCATTTTACCCAAGACTTTTGGCCAGAGCAGCATATAAAAGATCCTTTCCAAAAAGCGA
CACTGAGAAGATATAAAAACTGTGAACATAAAAATGTACATTTAAAAAAAGACCATAAAAGTGTGGATGA
GTGTAAGGTGCACAGAGGAGGTTATAATGGATTTAACCAATGTTTGCCAGCTACCCAGAGCAAAATATTT
CTATTTGATAAATGTGTGAAAGCCTTTCATAAATTTTCAAATTCAAACAGACATAAGATAAGCCATACTG
AAAAAAAACTTTTCAAATGCAAAGAATGTGGCAAATCATTTTGCATGCTTCCACATCTAGCTCAACATAA
AATAATTCATACCAGAGTGAATTTCTGCAAATGTGAAAAATGTGGAAAAGCTTTTAACTGCCCTTCAATC
ATCACTAAACATAAGAGAATTAATACTGGAGAGAAACCCTACACATGTGAAGAATGTGGCAAAGTCTTTA
ATTGGTCCTCACGCCTTACTACACATAAAAAAAATTATACTAGATACAAACTCTACAAATGTGAAGAATG
TGGCAAAGCTTTTAACAAGTCCTCAATCCTTACTACCCATAAGATAATTCGCACTGGAGAGAAATTCTAC
AAATGTAAAGAATGTGCCAAAGCTTTTAACCAATCCTCAAACCTTACTGAACATAAGAAAATTCATCCTG
GAGAGAAACCTTACAAATGTGAAGAATGTGGCAAAGCCTTTAACTGGCCCTCAACTCTTACTAAACATAA
GAGAATTCATACTGGAGAGAAACCCTACACATGTGAAGAATGTGGCAAAGCCTTTAACCAGTTCTCAAAC
CTTACTACACATAAGAGAATCCATACTGCAGAGAAATTCTATAAATGTACAGAATGTGGTGAAGCTTTTA
GCCGGTCCTCAAACCTTACTAAACATAAGAAAATTCATACTGAAAAGAAACCCTACAAATGTGAAGAATG
TGGCAAAGCTTTTAAGTGGTCCTCAAAGCTTACTGAACATAAGTTAACTCATACTGGAGAGAAACCCTAC
AAATGTGAAGAATGTGGCAAAGCCTTTAACTGGCCCTCAACCCTTACTAAACATAACAGAATTCATACTG
GAGAGAAACCCTACAAATGTGAAGTATGTGGCAAAGCCTTTAACCAGTTCTCAAACCTTACTACACATAA
GAGAATTCATACTGCAGAAAAACCGTACAAATGTGAAGAATGTGGCAAAGCTTTTAGCCGGTCCTCAAAC
CTTACTAAACATAAGAAAATTCACATTGAAAAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCTTTTA
AGTGGTCCTCAAAGCTTACTGAACATAAGATAACTCATACTGGAGAGAAACCCTACAAATGTGAAGAATG
TGGCAAAGCTTTTAACCATTTCTCAATCCTTACCAAACATAAGAGGATTCATACTGGAGAGAAACCCTAC
AAGTGTGAAGAATGTGGCAAAGCTTTTACCCAATCCTCAAACCTTACTACACATAAGAAAATTCATACTG
GAGAGAAATTCTACAAATGTGAAGAATGTGGCAAAGCTTTTACCCAATCTTCAAACCTTACTACACATAA
AAAAATTCATACTGGAGGAAAACCCTACAAATGTGAAGAATGTGGCAAAGCTTTTAACCAGTTCTCAACT
CTTACTAAACATAAGATAATTCACACTGAGGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCCTTTA
AGTGGTCCTCAACCCTTACTAAACATAAGATAATTCATACTGGAGAGAAACCCTACAAATGTGAAGAATG
TGGCAAAGCTTTTAAACTGTCCTCAACCCTTTCTACACATAAGATTATTCATACTGGAGAGAAACCCTAC
AAATGTGAAAAATGTGGCAAAGCTTTTAACCGATCCTCAAACCTTATTGAACATAAGAAAATTCATACTG
GAGAGCAACCCTACAAATGTGAAGAATGTGGCAAAGCATTTAACTATTCCTCACACCTTAATACACATAA
GAGAATTCATACTAAAGAGCAACCCTACAAATGTAAAGAATGTGGCAAAGCTTTCAACCAATATTCAAAC
CTTACTACACATAACAAAATTCATACTGGAGAGAAACTCTACAAACCTGAAGATGTGACAGTGATTTTGA
CAACACCTCAAACTTTTTCAAACATAAAATAA

Translation (803 aa):
MDVAIEFCLEEWQCLDIAQQNLYRNVMLENYRNLVFLGIAVSKPDLITCLEQEKEPWEPMRRHEMVAKPP
VMCSHFTQDFWPEQHIKDPFQKATLRRYKNCEHKNVHLKKDHKSVDECKVHRGGYNGFNQCLPATQSKIF
LFDKCVKAFHKFSNSNRHKISHTEKKLFKCKECGKSFCMLPHLAQHKIIHTRVNFCKCEKCGKAFNCPSI
ITKHKRINTGEKPYTCEECGKVFNWSSRLTTHKKNYTRYKLYKCEECGKAFNKSSILTTHKIIRTGEKFY
KCKECAKAFNQSSNLTEHKKIHPGEKPYKCEECGKAFNWPSTLTKHKRIHTGEKPYTCEECGKAFNQFSN
LTTHKRIHTAEKFYKCTECGEAFSRSSNLTKHKKIHTEKKPYKCEECGKAFKWSSKLTEHKLTHTGEKPY
KCEECGKAFNWPSTLTKHNRIHTGEKPYKCEVCGKAFNQFSNLTTHKRIHTAEKPYKCEECGKAFSRSSN
LTKHKKIHIEKKPYKCEECGKAFKWSSKLTEHKITHTGEKPYKCEECGKAFNHFSILTKHKRIHTGEKPY
KCEECGKAFTQSSNLTTHKKIHTGEKFYKCEECGKAFTQSSNLTTHKKIHTGGKPYKCEECGKAFNQFST
LTKHKIIHTEEKPYKCEECGKAFKWSSTLTKHKIIHTGEKPYKCEECGKAFKLSSTLSTHKIIHTGEKPY
KCEKCGKAFNRSSNLIEHKKIHTGEQPYKCEECGKAFNYSSHLNTHKRIHTKEQPYKCKECGKAFNQYSN
LTTHNKIHTGEKLYKPEDVTVILTTPQTFSNIK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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