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Report for CCDS591.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
591.1 Public Homo sapiens 1 SSBP3 24 110 108 CCDS HistoryNCBI Gene:23648Re-query CCDS DB by CCDS ID:591.1Re-query CCDS DB by GeneID:23648See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 591.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000610401.5 ENSP00000479674.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000610401.5Link to Ensembl Protein Viewer:ENSP00000479674.2Re-query CCDS DB by Nucleotide ID:ENST00000610401Re-query CCDS DB by Protein ID:ENSP00000479674
Original member Current member NCBI NM_145716.4 NP_663768.1 Accepted alive Link to Nucleotide Sequence:NM_145716.4Link to Protein Sequence:NP_663768.1Re-query CCDS DB by Nucleotide ID:NM_145716Re-query CCDS DB by Protein ID:NP_663768Link to BLAST:NP_663768.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_663768.1 388 Q9BWW4-1 388 100% 0 0

Chromosomal Locations for CCDS 591.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 54227131 54227160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54228255 54228356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54228449 54228477 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54228748 54228826 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54239129 54239199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54240905 54240959 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54241474 54241509 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54242164 54242212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54243235 54243299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54251616 54251692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54251794 54251860 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54257127 54257186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54258069 54258149 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54281438 54281527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54401861 54401945 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54404576 54404637 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54404858 54404930 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 54405953 54406008 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1167 nt):
ATGTTTGCCAAAGGCAAAGGCTCGGCGGTGCCCTCGGATGGGCAGGCTCGGGAAAAGTTAGCTTTATACG
TCTACGAATATTTACTGCACGTAGGAGCACAGAAATCTGCACAGACCTTCTTATCGGAGATTCGATGGGA
AAAAAACATCACGTTGGGAGAACCGCCTGGGTTTTTGCACTCGTGGTGGTGTGTATTTTGGGACCTTTAC
TGTGCAGCTCCTGAAAGGAGAGACACTTGTGAACATTCAAGTGAAGCAAAAGCCTTTCATGATTATAGTG
CAGCAGCTGCCCCGAGCCCCGTGCTTGGCAACATTCCCCCCAACGATGGGATGCCGGGAGGCCCCATCCC
GCCAGGTTTCTTTCAGGGTCCTCCGGGGTCACAGCCCTCGCCGCACGCACAGCCTCCACCTCACAATCCT
AGCAGCATGATGGGACCCCACAGTCAGCCTTTTATGTCACCGCGATACGCAGGCGGCCCCAGGCCCCCGA
TCAGAATGGGAAACCAGCCTCCGGGAGGAGTTCCTGGGACACAGCCATTGCTGCCCAATTCTATGGATCC
CACACGACAACAAGGCCACCCCAACATGGGAGGATCAATGCAGAGAATGAACCCTCCCCGAGGCATGGGG
CCCATGGGTCCCGGCCCACAGAATTACGGCAGCGGCATGAGACCACCACCCAACTCCCTCGGCCCCGCCA
TGCCCGGGATTAACATGGGCCCGGGAGCTGGCAGACCCTGGCCCAATCCTAACAGTGCTAACTCAATTCC
ATACTCCTCCTCATCACCTGGTACCTATGTGGGACCCCCTGGTGGTGGCGGTCCTCCAGGAACACCCATT
ATGCCCAGTCCCGCAGATTCAACAAATTCCAGTGACAACATCTACACAATGATTAATCCAGTGCCGCCTG
GAGGCAGCCGGTCCAACTTCCCGATGGGTCCCGGCTCGGACGGTCCGATGGGCGGCATGGGTGGCATGGA
GCCACACCACATGAATGGATCATTAGGGTCAGGCGACATAGACGGACTTCCAAAAAATTCTCCTAACAAC
ATAAGTGGCATTAGCAATCCTCCAGGCACCCCTCGAGATGACGGCGAGCTAGGAGGGAACTTCCTCCACT
CCTTTCAGAACGACAATTATTCTCCAAGCATGACGATGAGTGTGTGA

Translation (388 aa):
MFAKGKGSAVPSDGQAREKLALYVYEYLLHVGAQKSAQTFLSEIRWEKNITLGEPPGFLHSWWCVFWDLY
CAAPERRDTCEHSSEAKAFHDYSAAAAPSPVLGNIPPNDGMPGGPIPPGFFQGPPGSQPSPHAQPPPHNP
SSMMGPHSQPFMSPRYAGGPRPPIRMGNQPPGGVPGTQPLLPNSMDPTRQQGHPNMGGSMQRMNPPRGMG
PMGPGPQNYGSGMRPPPNSLGPAMPGINMGPGAGRPWPNPNSANSIPYSSSSPGTYVGPPGGGGPPGTPI
MPSPADSTNSSDNIYTMINPVPPGGSRSNFPMGPGSDGPMGGMGGMEPHHMNGSLGSGDIDGLPKNSPNN
ISGISNPPGTPRDDGELGGNFLHSFQNDNYSPSMTMSV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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