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Report for CCDS58292.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58292.1 Public Homo sapiens 13 DHRS12 24 110 108 CCDS HistoryNCBI Gene:79758Re-query CCDS DB by CCDS ID:58292.1Re-query CCDS DB by GeneID:79758See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58292.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000682342.2 ENSP00000507480.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000682342.2Link to Ensembl Protein Viewer:ENSP00000507480.2Re-query CCDS DB by Nucleotide ID:ENST00000682342Re-query CCDS DB by Protein ID:ENSP00000507480
Original member Current member NCBI NM_001270424.1 NP_001257353.1 Accepted alive Link to Nucleotide Sequence:NM_001270424.1Link to Protein Sequence:NP_001257353.1Re-query CCDS DB by Nucleotide ID:NM_001270424Re-query CCDS DB by Protein ID:NP_001257353Link to BLAST:NP_001257353.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001257353.1 317 A0PJE2-1 317 100% 0 0

Chromosomal Locations for CCDS 58292.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 51768187 51768296 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 51769156 51769293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 51771821 51771911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 51773930 51774034 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 51777060 51777121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 51790011 51790092 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 51791165 51791257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 51797826 51797908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 51799534 51799667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 51804054 51804109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (954 nt):
ATGTCCCTGTACCGCAGCGTCGTGTGGTTCGCCAAGGGGCTGCGCGAGTACACCAAGAGTGGCTATGAAT
CTGCATGTAAAGACTTTGTCCCTCATGACTTGGAGGTCCAGATTCCTGGAAGAGTCTTTTTGGTCACTGG
AGGAAACAGCGGCATTGGCAAAGCAACTGCCCTTGAAATCGCCAAGCGAGGTGGCACAGTTCACCTGGTT
TGTCGAGATCAAGCCCCAGCAGAAGATGCCAGGGGTGAGATCATCCGGGAGAGCGGTAACCAGAACATTT
TTCTGCACATTGTGGACTTGTCTGATCCCAAGCAAATCTGGAAATTTGTTGAAAATTTCAAGCAGGAACA
TAAACTCCATGTTCTGATCAATAATGCAGGTTGCATGGTCAATAAAAGAGAGCTCACAGAAGATGGACTT
GAAAAAAACTTTGCTGCCAATACTCTGGGTGTGTACATTCTCACGACCGGCCTGATCCCTGTGCTGGAGA
AAGAACACGACCCCCGAGTGATAACCGTCTCCTCAGGAGGAATGTTGGTTCAGAAACTGAACACCAATGA
TCTCCAGTCCGAAAGAACACCATTTGATGGAACTATGGTCTATGCACAAAACAAGAGGCAGCAAGTGGTT
CTGACGGAGCGGTGGGCCCAAGGGCACCCGGCCATCCATTTTTCTTCCATGCATCCTGGCTGGGCCGACA
CCCCAGGTGTGAGGCAGGCGATGCCGGGGTTCCACGCCAGGTTCGGGGACCGCCTGCGCTCCGAGGCCCA
GGGCGCGGACACCATGCTGTGGCTGGCCCTCTCCTCTGCCGCAGCCGCACAGCCCAGCGGCCGCTTCTTT
CAAGATCGGAAGCCAGTTTCTACACACTTGCCTCTCGCTACAGCGTCCTCCTCACCGGCCGAAGAGGAGA
AACTCATTGAAATCCTGGAACAGCTGGCTCAGACATTTAAATAG

Translation (317 aa):
MSLYRSVVWFAKGLREYTKSGYESACKDFVPHDLEVQIPGRVFLVTGGNSGIGKATALEIAKRGGTVHLV
CRDQAPAEDARGEIIRESGNQNIFLHIVDLSDPKQIWKFVENFKQEHKLHVLINNAGCMVNKRELTEDGL
EKNFAANTLGVYILTTGLIPVLEKEHDPRVITVSSGGMLVQKLNTNDLQSERTPFDGTMVYAQNKRQQVV
LTERWAQGHPAIHFSSMHPGWADTPGVRQAMPGFHARFGDRLRSEAQGADTMLWLALSSAAAAQPSGRFF
QDRKPVSTHLPLATASSSPAEEEKLIEILEQLAQTFK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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