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Report for CCDS56156.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56156.1 Public Homo sapiens 2 BZW1 24 110 108 CCDS HistoryNCBI Gene:9689Re-query CCDS DB by CCDS ID:56156.1Re-query CCDS DB by GeneID:9689See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 56156.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000409600.6 ENSP00000386474.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000409600.6Link to Ensembl Protein Viewer:ENSP00000386474.1Re-query CCDS DB by Nucleotide ID:ENST00000409600Re-query CCDS DB by Protein ID:ENSP00000386474
Original member Current member NCBI NM_001207067.2 NP_001193996.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001207067.2Link to Protein Sequence:NP_001193996.1Re-query CCDS DB by Nucleotide ID:NM_001207067Re-query CCDS DB by Protein ID:NP_001193996Link to BLAST:NP_001193996.1
Original member Current member NCBI NM_001321688.2 NP_001308617.1 Accepted alive Link to Nucleotide Sequence:NM_001321688.2Link to Protein Sequence:NP_001308617.1Re-query CCDS DB by Nucleotide ID:NM_001321688Re-query CCDS DB by Protein ID:NP_001308617Link to BLAST:NP_001308617.1
Original member Current member NCBI NM_001321690.1 NP_001308619.1 Accepted alive Link to Nucleotide Sequence:NM_001321690.1Link to Protein Sequence:NP_001308619.1Re-query CCDS DB by Nucleotide ID:NM_001321690Re-query CCDS DB by Protein ID:NP_001308619Link to BLAST:NP_001308619.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001193996.1 419 Q7L1Q6-1 419 100% 0 0
NP_001308617.1 419 Q7L1Q6-1 419 100% 0 0
NP_001308619.1 419 Q7L1Q6-1 419 100% 0 0

Chromosomal Locations for CCDS 56156.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 200813218 200813281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200815341 200815517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200815667 200815761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200816325 200816390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200817106 200817241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200817974 200818083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200818223 200818393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200818755 200818901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200819982 200820120 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200821183 200821305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 200822147 200822178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1260 nt):
ATGAATAATCAAAAGCAGCAAAAGCCAACGCTATCAGGCCAGCGTTTTAAAACTAGAAAAAGAGATGAAA
AAGAGAGGTTTGACCCTACTCAGTTTCAAGACTGTATTATTCAAGGCTTAACTGAAACCGGTACTGATTT
GGAAGCAGTAGCTAAGTTTCTTGATGCTTCTGGAGCAAAACTTGATTACCGTCGATATGCAGAAACACTC
TTTGACATTCTGGTGGCTGGTGGAATGCTGGCCCCAGGTGGTACACTGGCAGATGACATGATGCGTACAG
ATGTCTGCGTGTTTGCAGCCCAAGAAGATCTAGAGACCATGCAAGCATTTGCTCAGGTTTTTAACAAGTT
AATCAGGCGCTACAAATACCTGGAGAAAGGTTTTGAAGATGAAGTAAAAAAGCTGCTGCTGTTCTTGAAG
GGTTTTTCAGAGTCGGAGAGGAACAAGCTAGCTATGTTGACTGGTGTTCTTCTGGCTAATGGAACACTTA
ATGCATCCATTCTTAATAGCCTTTATAATGAAAATTTGGTTAAAGAAGGAGTTTCAGCAGCTTTTGCTGT
GAAGCTCTTTAAATCATGGATAAATGAAAAAGATATCAATGCAGTAGCTGCAAGTCTTCGGAAAGTCAGC
ATGGATAACAGACTGATGGAACTCTTTCCTGCCAATAAGCAAAGTGTTGAACACTTCACAAAATATTTTA
CTGAGGCAGGCTTGAAAGAGCTTTCAGAATATGTTCGGAATCAGCAAACCATCGGAGCTCGTAAGGAGCT
CCAGAAAGAACTTCAAGAACAGATGTCCCGTGGTGATCCATTTAAGGATATAATTTTATATGTCAAGGAG
GAGATGAAAAAAAACAACATCCCAGAGCCAGTTGTCATCGGAATAGTCTGGTCAAGTGTAATGAGCACTG
TGGAATGGAACAAAAAAGAGGAGCTTGTAGCAGAGCAAGCCATCAAGCACTTGAAGCAATACAGCCCTCT
ACTTGCTGCCTTTACTACTCAAGGTCAGTCTGAGCTGACTCTGTTACTGAAGATTCAGGAGTATTGCTAT
GACAACATTCATTTCATGAAAGCCTTCCAGAAAATAGTGGTGCTTTTTTATAAAGCTGAAGTCCTGAGCG
AGGAGCCCATTTTGAAGTGGTATAAAGATGCACATGTTGCAAAGGGGAAGAGTGTTTTCCTTGAGCAAAT
GAAAAAGTTTGTAGAATGGCTCAAAAATGCTGAAGAAGAATCTGAATCTGAAGCTGAAGAAGGTGACTGA

Translation (419 aa):
MNNQKQQKPTLSGQRFKTRKRDEKERFDPTQFQDCIIQGLTETGTDLEAVAKFLDASGAKLDYRRYAETL
FDILVAGGMLAPGGTLADDMMRTDVCVFAAQEDLETMQAFAQVFNKLIRRYKYLEKGFEDEVKKLLLFLK
GFSESERNKLAMLTGVLLANGTLNASILNSLYNENLVKEGVSAAFAVKLFKSWINEKDINAVAASLRKVS
MDNRLMELFPANKQSVEHFTKYFTEAGLKELSEYVRNQQTIGARKELQKELQEQMSRGDPFKDIILYVKE
EMKKNNIPEPVVIGIVWSSVMSTVEWNKKEELVAEQAIKHLKQYSPLLAAFTTQGQSELTLLLKIQEYCY
DNIHFMKAFQKIVVLFYKAEVLSEEPILKWYKDAHVAKGKSVFLEQMKKFVEWLKNAEEESESEAEEGD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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