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Report for CCDS55992.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55992.1 Public Homo sapiens 16 CCP110 24 110 108 CCDS HistoryNCBI Gene:9738Re-query CCDS DB by CCDS ID:55992.1Re-query CCDS DB by GeneID:9738See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55992.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000381396.9 ENSP00000370803.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000381396.9Link to Ensembl Protein Viewer:ENSP00000370803.5Re-query CCDS DB by Nucleotide ID:ENST00000381396Re-query CCDS DB by Protein ID:ENSP00000370803
Original member Current member NCBI NM_001199022.3 NP_001185951.2 Accepted alive Link to Nucleotide Sequence:NM_001199022.3Link to Protein Sequence:NP_001185951.2Re-query CCDS DB by Nucleotide ID:NM_001199022Re-query CCDS DB by Protein ID:NP_001185951Link to BLAST:NP_001185951.2
Original member Current member NCBI NM_001323569.2 NP_001310498.1 Accepted alive Link to Nucleotide Sequence:NM_001323569.2Link to Protein Sequence:NP_001310498.1Re-query CCDS DB by Nucleotide ID:NM_001323569Re-query CCDS DB by Protein ID:NP_001310498Link to BLAST:NP_001310498.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001185951.2 1012 O43303-1 1012 100% 0 0
NP_001310498.1 1012 O43303-1 1012 100% 0 0

Chromosomal Locations for CCDS 55992.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 19527882 19528022 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 19532416 19532544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 19535940 19537587 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 19540657 19540787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 19541887 19542064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 19542621 19542760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 19542878 19542994 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 19544797 19544898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 19545094 19545210 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 19545817 19545890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 19546412 19546474 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 19547955 19548014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 19548515 19548600 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 19551196 19551248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3039 nt):
ATGGAGGAGTATGAGAAGTTCTGTGAAAAAAGTCTTGCCAGAATACAAGAAGCATCACTATCCACAGAGA
GCTTTCTCCCTGCTCAGTCTGAAAGTATCTCACTTATTCGCTTTCATGGAGTGGCTATCCTTTCTCCACT
GCTTAACATTGAGAAAAGAAAGGAAATGCAACAAGAAAAGCAGAAAGCACTTGATGTAGAAGCAAGAAAG
CAGGTTAACAGGAAGAAAGCTTTACTGACTCGTGTCCAGGAGATTCTTGACAATGTTCAGGTTAGAAAAG
CACCTAATGCCAGTGATTTTGATCAGTGGGAGATGGAAACAGTTTACTCTAATTCAGAAGTCAGAAACTT
GAATGTTCCTGCTACATTTCCAAATAGCTTTCCAAGCCATACGGAACACTCTACTGCAGCAAAGCTTGAT
AAGATAGCTGGGATTTTGCCATTGGATAATGAGGACCAATGTAAAACTGATGGAATAGACTTAGCTAGAG
ATTCAGAAGGATTTAATTCTCCGAAGCAATGTGATAGTTCCAATATTAGTCATGTAGAAAATGAAGCTTT
TCCAAAGACCTCTTCAGCAACCCCACAAGAAACTCTTATTTCTGATGGTCCCTTCTCAGTAAATGAACAA
CAGGATCTACCACTTTTGGCAGAAGTCATCCCAGATCCCTATGTAATGAGTCTTCAGAATCTGATGAAAA
AGTCAAAGGAATATATAGAAAGAGAACAATCTAGACGCAGTCTGAGAGGTAGTATCAACAGAATTGTTAA
TGAGAGTCATTTAGACAAAGAACATGATGCTGTTGAAGTGGCTGACTGTGTAAAAGAGAAAGGCCAGTTG
ACAGGCAAACACTGTGTCTCAGTTATTCCTGACAAACCAAGCCTTAATAAATCAAATGTTCTTCTCCAAG
GTGCTTCCACTCAAGCAAGCAGCATGAGTATGCCAGTTTTAGCTAGCTTTTCGAAAGTGGACATACCTAT
ACGAACTGGCCATCCCACTGTTCTAGAGTCTAATTCTGATTTTAAAGTTATTCCCACTTTTGTTACCGAA
AATAATGTTATCAAAAGTCTTACAGGTTCATATGCCAAATTACCTAGTCCAGAGCCAAGTATGAGTCCTA
AAATGCACCGAAGACGTTCCAGGACATCATCAGCGTGTCATATACTTATAAATAACCCAATAAATGCCTG
TGAATTAAGCCCTAAAGGAAAAGAACAGGCAATGGACTTAATTATTCAAGATACTGATGAAAACACAAAT
GTGCCCGAAATTATGCCAAAGTTACCAACTGATTTAGCGGGAGTTTGTTCAAGCAAGGTTTATGTGGGCA
AAAATACATCTGAAGTCAAAGAAGATGTGGTTTTAGGTAAATCAAATCAGGTATGTCAATCTTCAGGAAA
TCATTTAGAAAATAAAGTTACTCATGGACTTGTTACTGTGGAAGGTCAGTTAACATCCGATGAGAGAGGC
GCACACATAATGAACAGTACCTGTGCTGCGATGCCAAAGCTGCATGAACCATATGCCAGCAGTCAGTGTA
TAGCAAGTCCAAACTTTGGAACTGTGAGTGGACTCAAGCCAGCCAGTATGTTAGAGAAAAACTGCAGTTT
GCAAACAGAACTGAATAAGTCTTATGATGTAAAAAACCCTTCTCCTTTATTGATGCAAAACCAGAATACG
AGACAGCAGATGGACACACCTATGGTGTCCTGTGGAAATGAACAATTTTTGGATAACAGTTTTGAGAAAG
TTAAACGGAGACTTGATTTAGATATTGATGGTTTGCAAAAAGAAAACTGCCCTTATGTCATAACAAGTGG
AATAACTGAACAAGAAAGGCAACATTTGCCAGAAAAAAGATACCCTAAGGGATCTGGCTTCGTTAACAAG
AATAAAATGTTAGGAACTAGTTCCAAAGAAAGCGAGGAGTTACTAAAAAGCAAGATGTTAGCTTTTGAAG
AAATGCGGAAGAGACTAGAAGAACAGCACGCCCAGCAATTATCACTACTCATAGCTGAGCAGGAAAGGGA
ACAAGAAAGACTGCAAAAGGAAATAGAAGAGCAGGAGAAAATGTTAAAAGAGAAGAAGGCAATGACAGCG
GAAGCCTCTGAGTTGGACATTAACAATGCAGTGGAATTAGAATGGAGAAAAATAAGTGACTCTAGTTTGC
TGGAAACAATGCTGTCTCAAGCGGACTCACTCCATACTTCAAATTCAAATAGTTCTGGTTTCACAAATTC
TGCCATGCAATATAGCTTTGTTTCTGCAAACGAAGCACCATTCTACCTCTGGGGATCATCAACTAGTGGC
TTGACCAAACTCTCAGTAACAAGGCCTTTTGGAAGAGCCAAAACTAGATGGTCTCAAGTTTTTAGTCTGG
AAATACAAGCAAAATTTAACAAAATAACTGCAGTGGCAAAAGGATTTCTTACTCGTAGACTTATGCAGAC
AGATAAGCTGAAGCAACTTCGACAAACTGTAAAAGATACTATGGAATTCATAAGAAGTTTTCAGTCAGAA
GCACCATTAAAGAGAGGCATTGTTTCAGCTCAAGATGCTTCACTTCAGGAAAGAGTGTTAGCTCAGTTGC
GAGCTGCCTTGTACGGTATTCATGACATATTCTTTGTAATGGATGCAGCTGAAAGAATGTCTATTCTACA
TCATGATCGAGAAGTTCGCAAAGAGAAAATGCTCAGGCAAATGGATAAAATGAAAAGTCCACGAGTGGCT
CTTTCAGCTGCAACACAGAAGTCTCTTGATAGGAAGAAATACATGAAAGCTGCTGAAATGGGAATGCCAA
ATAAGAAATTTCTGGTTAAACAAAATCCTTCTGAAACAAGAGTCCTTCAGCCAAACCAAGGACAGAATGC
ACCTGTTCATAGGCTACTTAGTAGACAAGGAACCCCTAAGACATCAGTGAAGGGGGTTGTGCAAAATAGA
CAGAAGCCTTCACAGAGCAGAGTGCCTAACAGAGTGCCTGTTTCAGGAGTATATGCAGGAAAAATCCAAA
GAAAGCGGCCAAATGTTGCGACAATTTAA

Translation (1012 aa):
MEEYEKFCEKSLARIQEASLSTESFLPAQSESISLIRFHGVAILSPLLNIEKRKEMQQEKQKALDVEARK
QVNRKKALLTRVQEILDNVQVRKAPNASDFDQWEMETVYSNSEVRNLNVPATFPNSFPSHTEHSTAAKLD
KIAGILPLDNEDQCKTDGIDLARDSEGFNSPKQCDSSNISHVENEAFPKTSSATPQETLISDGPFSVNEQ
QDLPLLAEVIPDPYVMSLQNLMKKSKEYIEREQSRRSLRGSINRIVNESHLDKEHDAVEVADCVKEKGQL
TGKHCVSVIPDKPSLNKSNVLLQGASTQASSMSMPVLASFSKVDIPIRTGHPTVLESNSDFKVIPTFVTE
NNVIKSLTGSYAKLPSPEPSMSPKMHRRRSRTSSACHILINNPINACELSPKGKEQAMDLIIQDTDENTN
VPEIMPKLPTDLAGVCSSKVYVGKNTSEVKEDVVLGKSNQVCQSSGNHLENKVTHGLVTVEGQLTSDERG
AHIMNSTCAAMPKLHEPYASSQCIASPNFGTVSGLKPASMLEKNCSLQTELNKSYDVKNPSPLLMQNQNT
RQQMDTPMVSCGNEQFLDNSFEKVKRRLDLDIDGLQKENCPYVITSGITEQERQHLPEKRYPKGSGFVNK
NKMLGTSSKESEELLKSKMLAFEEMRKRLEEQHAQQLSLLIAEQEREQERLQKEIEEQEKMLKEKKAMTA
EASELDINNAVELEWRKISDSSLLETMLSQADSLHTSNSNSSGFTNSAMQYSFVSANEAPFYLWGSSTSG
LTKLSVTRPFGRAKTRWSQVFSLEIQAKFNKITAVAKGFLTRRLMQTDKLKQLRQTVKDTMEFIRSFQSE
APLKRGIVSAQDASLQERVLAQLRAALYGIHDIFFVMDAAERMSILHHDREVRKEKMLRQMDKMKSPRVA
LSAATQKSLDRKKYMKAAEMGMPNKKFLVKQNPSETRVLQPNQGQNAPVHRLLSRQGTPKTSVKGVVQNR
QKPSQSRVPNRVPVSGVYAGKIQRKRPNVATI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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