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Report for CCDS55894.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55894.1 Public Homo sapiens 13 NBEA 24 110 108 CCDS HistoryNCBI Gene:26960Re-query CCDS DB by CCDS ID:55894.1Re-query CCDS DB by GeneID:26960See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55894.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000537702.6 ENSP00000440233.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000537702.6Link to Ensembl Protein Viewer:ENSP00000440233.1Re-query CCDS DB by Nucleotide ID:ENST00000537702Re-query CCDS DB by Protein ID:ENSP00000440233
Original member Current member EBI ENST00000686952.1 ENSP00000509331.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000686952.1Link to Ensembl Protein Viewer:ENSP00000509331.1Re-query CCDS DB by Nucleotide ID:ENST00000686952Re-query CCDS DB by Protein ID:ENSP00000509331
Original member Current member EBI ENST00000689454.1 ENSP00000509389.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000689454.1Link to Ensembl Protein Viewer:ENSP00000509389.1Re-query CCDS DB by Nucleotide ID:ENST00000689454Re-query CCDS DB by Protein ID:ENSP00000509389
Original member Current member EBI ENST00000685329.1 ENSP00000509799.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000685329.1Link to Ensembl Protein Viewer:ENSP00000509799.1Re-query CCDS DB by Nucleotide ID:ENST00000685329Re-query CCDS DB by Protein ID:ENSP00000509799
Original member Current member EBI ENST00000693262.1 ENSP00000509811.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000693262.1Link to Ensembl Protein Viewer:ENSP00000509811.1Re-query CCDS DB by Nucleotide ID:ENST00000693262Re-query CCDS DB by Protein ID:ENSP00000509811
Original member Current member EBI ENST00000685686.1 ENSP00000509879.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000685686.1Link to Ensembl Protein Viewer:ENSP00000509879.1Re-query CCDS DB by Nucleotide ID:ENST00000685686Re-query CCDS DB by Protein ID:ENSP00000509879
Original member Current member EBI ENST00000686741.1 ENSP00000510596.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000686741.1Link to Ensembl Protein Viewer:ENSP00000510596.1Re-query CCDS DB by Nucleotide ID:ENST00000686741Re-query CCDS DB by Protein ID:ENSP00000510596
Original member Current member NCBI NM_001204197.3 NP_001191126.1 Accepted alive Link to Nucleotide Sequence:NM_001204197.3Link to Protein Sequence:NP_001191126.1Re-query CCDS DB by Nucleotide ID:NM_001204197Re-query CCDS DB by Protein ID:NP_001191126Link to BLAST:NP_001191126.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001191126.1 739 Q8NFP9-3 739 100% 0 0

Chromosomal Locations for CCDS 55894.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 35550513 35550594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 35550930 35551032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 35554987 35555102 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 35566905 35567017 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 35583898 35584038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 35593328 35593447 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 35606426 35606578 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 35628081 35628248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 35646259 35646348 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 35649655 35649847 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 35651805 35651876 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 35654855 35655010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 35655579 35655749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 35665085 35665186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 35667374 35667570 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 35668368 35668519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 35670901 35670991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2220 nt):
ATGTTCAGCGAGATACGAGCTGTATTTTCAAGACGTTACCTTCTACAAAACACTGCTTTGGAAGTATTTA
TGGCAAACCGAACCTCAGTTATGTTTAATTTCCCTGATCAAGCAACAGTAAAAAAAGTTGTCTATAGCTT
GCCTCGGGTTGGAGTAGGGACCAGCTATGGTCTGCCACAAGCCAGGAGGATATCATTGGCCACTCCTCGA
CAGCTTTATAAATCTTCCAATATGACTCAGCGCTGGCAAAGAAGGGAAATTTCAAACTTCGAATATTTGA
TGTTCCTTAATACTATTGCAGGACGGACATATAATGATCTGAACCAATATCCAGTGTTTCCGTGGGTGTT
AACCAACTATGAATCAGAAGAGTTGGACCTGACTCTTCCAGGAAACTTCAGGGATCTATCAAAGCCAATT
GGTGCTTTGAACCCCAAGAGAGCTGTGTTTTATGCAGAGCGTTATGAGACATGGGAAGATGATCAAAGCC
CACCCTACCATTATAATACCCATTATTCAACAGCAACATCTACTTTATCCTGGCTTGTTCGAATTGAACC
TTTCACAACCTTCTTCCTCAATGCAAATGATGGAAAATTTGATCATCCAGATCGAACCTTCTCATCCGTT
GCAAGGTCTTGGAGAACTAGTCAGAGAGATACTTCTGATGTAAAGGAACTAATTCCAGAGTTCTACTACC
TACCAGAGATGTTTGTCAACAGTAATGGATATAATCTTGGAGTCAGAGAAGATGAAGTAGTGGTAAATGA
TGTTGATCTTCCCCCTTGGGCAAAAAAACCTGAAGACTTTGTGCGGATCAACAGGATGGCCCTAGAAAGT
GAATTTGTTTCTTGCCAACTTCATCAGTGGATCGACCTTATATTTGGCTATAAGCAGCGAGGACCAGAAG
CAGTTCGTGCTCTGAATGTTTTTCACTACTTGACTTATGAAGGCTCTGTGAACCTGGATAGTATCACTGA
TCCTGTGCTCAGGGAGGCCATGGAGGCACAGATACAGAACTTTGGACAGACGCCATCTCAGTTGCTTATT
GAGCCACATCCGCCTCGGAGCTCTGCCATGCACCTGTGTTTCCTTCCACAGAGTCCGCTCATGTTTAAAG
ATCAGATGCAACAGGATGTGATAATGGTGCTGAAGTTTCCTTCAAATTCTCCAGTAACCCATGTGGCAGC
CAACACTCTGCCCCACTTGACCATCCCCGCAGTGGTGACAGTGACTTGCAGCCGACTCTTTGCAGTGAAT
AGATGGCACAACACAGTAGGCCTCAGAGGAGCTCCAGGATACTCCTTGGATCAAGCCCACCATCTTCCCA
TTGAAATGGATCCATTAATAGCCAATAATTCAGGTGTAAACAAACGGCAGATCACAGACCTCGTTGACCA
GAGTATACAAATCAATGCACATTGTTTTGTGGTAACAGCAGATAATCGCTATATTCTTATCTGTGGATTC
TGGGATAAGAGCTTCAGAGTTTATTCTACAGAAACAGGGAAATTGACTCAGATTGTATTTGGCCATTGGG
ATGTGGTCACTTGCTTGGCCAGGTCCGAGTCATACATTGGTGGGGACTGCTACATCGTGTCCGGATCTCG
AGATGCCACCCTGCTGCTCTGGTACTGGAGTGGGCGGCACCATATCATAGGAGACAACCCTAACAGCAGT
GACTATCCGGCACCAAGAGCCGTCCTCACAGGCCATGACCATGAAGTTGTCTGTGTTTCTGTCTGTGCAG
AACTTGGGCTTGTTATCAGTGGTGCTAAAGAGGGCCCTTGCCTTGTCCACACCATCACTGGAGATTTGCT
GAGAGCCCTTGAAGGACCAGAAAACTGCTTATTCCCACGCTTGATATCTGTCTCCAGCGAAGGCCACTGT
ATCATATACTATGAACGAGGGCGATTCAGTAATTTCAGCATTAATGGGAAACTTTTGGCTCAAATGGAGA
TCAATGATTCAACACGGGCCATTCTCCTGAGCAGTGACGGCCAGAACCTGGTCACCGGAGGGGACAATGG
GGTAGTAGAGGTCTGGCAGGCCTGTGACTTCAAGCAACTGTACATTTACCCTGGATGTGATGCTGGCATT
AGAGCAATGGACTTGTCCCATGACCAGAGGACTCTGATCACTGGCATGGCTTCTGGTAGCATTGTAGCTT
TTAATATAGATTTTAATCGGTGGCATTATGAGCATCAGAACAGATACTGA

Translation (739 aa):
MFSEIRAVFSRRYLLQNTALEVFMANRTSVMFNFPDQATVKKVVYSLPRVGVGTSYGLPQARRISLATPR
QLYKSSNMTQRWQRREISNFEYLMFLNTIAGRTYNDLNQYPVFPWVLTNYESEELDLTLPGNFRDLSKPI
GALNPKRAVFYAERYETWEDDQSPPYHYNTHYSTATSTLSWLVRIEPFTTFFLNANDGKFDHPDRTFSSV
ARSWRTSQRDTSDVKELIPEFYYLPEMFVNSNGYNLGVREDEVVVNDVDLPPWAKKPEDFVRINRMALES
EFVSCQLHQWIDLIFGYKQRGPEAVRALNVFHYLTYEGSVNLDSITDPVLREAMEAQIQNFGQTPSQLLI
EPHPPRSSAMHLCFLPQSPLMFKDQMQQDVIMVLKFPSNSPVTHVAANTLPHLTIPAVVTVTCSRLFAVN
RWHNTVGLRGAPGYSLDQAHHLPIEMDPLIANNSGVNKRQITDLVDQSIQINAHCFVVTADNRYILICGF
WDKSFRVYSTETGKLTQIVFGHWDVVTCLARSESYIGGDCYIVSGSRDATLLLWYWSGRHHIIGDNPNSS
DYPAPRAVLTGHDHEVVCVSVCAELGLVISGAKEGPCLVHTITGDLLRALEGPENCLFPRLISVSSEGHC
IIYYERGRFSNFSINGKLLAQMEINDSTRAILLSSDGQNLVTGGDNGVVEVWQACDFKQLYIYPGCDAGI
RAMDLSHDQRTLITGMASGSIVAFNIDFNRWHYEHQNRY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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