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Report for CCDS55378.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55378.1 Public Homo sapiens X ADGRG2 24 110 108 CCDS HistoryNCBI Gene:10149Re-query CCDS DB by CCDS ID:55378.1Re-query CCDS DB by GeneID:10149See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 55378.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000379878.7 ENSP00000369207.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000379878.7Link to Ensembl Protein Viewer:ENSP00000369207.3Re-query CCDS DB by Nucleotide ID:ENST00000379878Re-query CCDS DB by Protein ID:ENSP00000369207
Original member Current member NCBI NM_001184833.2 NP_001171762.1 Accepted alive Link to Nucleotide Sequence:NM_001184833.2Link to Protein Sequence:NP_001171762.1Re-query CCDS DB by Nucleotide ID:NM_001184833Re-query CCDS DB by Protein ID:NP_001171762Link to BLAST:NP_001171762.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001171762.1 1001 Q8IZP9-3 1001 100% 0 0

Chromosomal Locations for CCDS 55378.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 18990864 18991048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 18994896 18995048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 18996051 18996152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 18998996 18999279 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 18999861 18999960 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19002846 19003114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19004758 19004879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19006002 19006105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19006220 19006265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19007235 19007357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19007980 19008123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19009626 19009782 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19010613 19010778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19013686 19014074 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19019599 19019665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19021104 19021198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19023416 19023453 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19023909 19023948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19027219 19027274 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19028183 19028238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19030984 19031037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19033613 19033654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19035942 19035977 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19037467 19037490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19040189 19040224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19068717 19068834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3006 nt):
ATGGTTTTCTCTGTCAGGCAGTGTGGCCATGTTGGCAGAACTGAAGAAGTTTTACTGACGTTCAAGATAT
TCCTTGTCATCATTTGTCTTCATGTCGTTCTGGTAACATCCCTGGAAGAAGATACTGATAATTCCAGTTT
GTCACCACCACCTGAGGTTGAAACAACAAGCCTCAATGATGTTACTTTAAGCTTACTCCCTTCAAACGAA
ACAGAAAAAACTAAAATCACTATAGTAAAAACCTTCAATGCATCAGGCGTCAAACCCCAGAGAAATATCT
GCAATTTGTCATCTATTTGCAATGACTCAGCATTTTTTAGAGGTGAGATCATGTTTCAATATGATAAAGA
AAGCACTGTTCCCCAGAATCAACATATAACGAATGGCACCTTAACTGGAGTCCTGTCTCTAAGTGAATTA
AAACGCTCAGAGCTCAACAAAACCCTGCAAACCCTAAGTGAGACTTACTTTATAATGTGTGCTACAGCAG
AGGCCCAAAGCACATTAAATTGTACATTCACAATAAAACTGAATAATACAATGAATGCATGTGCTGTAAT
AGCTGCTTTGGAAAGAGTAAAGATTCGACCAATGGAACACTGCTGCTGTTCTGTCAGGATACCCTGCCCT
TCCTCCCCAGAAGAGTTGGAAAAGCTTCAGTGTGACCTGCAGGATCCCATTGTCTGTCTTGCTGACCATC
CACGTGGCCCACCATTTTCTTCCAGCCAATCCATCCCAGTGGTGCCTCGGGCCACTGTGCTTTCCCAGGT
CCCCAAAGCTACCTCTTTTGCTGAGCCTCCAGATTATTCACCTGTGACCCACAATGTTCCCTCTCCAATA
GGGGAGATTCAACCCCTTTCACCCCAGCCTTCAGCTCCCATAGCTTCCAGCCCTGCCATTGACATGCCCC
CACAGTCTGAAACGATCTCTTCCCCTATGCCCCAAACCCATGTCTCCGGCACCCCACCTCCTGTGAAAGC
CTCATTTTCCTCTCCCACCGTGTCTGCCCCTGCGAATGTCAACACTACCAGCGCACCTCCTGTCCAGACA
GACATCGTCAACACCAGCAGTATTTCTGATCTTGAGAACCAAGTGTTGCAGATGGAGAAGGCTCTGTCCT
TGGGCAGCCTGGAGCCTAACCTCGCAGGAGAAATGATCAACCAAGTCAGCAGACTCCTTCATTCCCCGCC
TGACATGCTGGCCCCTCTGGCTCAAAGATTGCTGAAAGTAGTGGATGACATTGGCCTACAGCTGAACTTT
TCAAACACGACTATAAGTCTAACCTCCCCTTCTTTGGCTCTGGCTGTGATCAGAGTGAATGCCAGTAGTT
TCAACACAACTACCTTTGTGGCCCAAGACCCTGCAAATCTTCAGGTTTCTCTGGAAACCCAAGCTCCTGA
GAACAGTATTGGCACAATTACTCTTCCTTCATCGCTGATGAATAATTTACCAGCTCATGACATGGAGCTA
GCTTCCAGGGTTCAGTTCAATTTTTTTGAAACACCTGCTTTGTTTCAGGATCCTTCCCTGGAGAACCTCT
CTCTGATCAGCTACGTCATATCATCGAGTGTTGCAAACCTGACCGTCAGGAACTTGACAAGAAACGTGAC
AGTCACATTAAAGCACATCAACCCGAGCCAGGATGAGTTAACAGTGAGATGTGTATTTTGGGACTTGGGC
AGAAATGGTGGCAGAGGAGGCTGGTCAGACAATGGCTGCTCTGTCAAAGACAGGAGATTGAATGAAACCA
TCTGTACCTGTAGCCATCTAACAAGCTTCGGCGTTCTGCTGGACCTATCTAGGACATCTGTGCTGCCTGC
TCAAATGATGGCTCTGACGTTCATTACATATATTGGTTGTGGGCTTTCATCAATTTTTCTGTCAGTGACT
CTTGTAACCTACATAGCTTTTGAAAAGATCCGGAGGGATTACCCTTCCAAAATCCTCATCCAGCTGTGTG
CTGCTCTGCTTCTGCTGAACCTGGTCTTCCTCCTGGACTCGTGGATTGCTCTGTATAAGATGCAAGGCCT
CTGCATCTCAGTGGCTGTATTTCTTCATTATTTTCTCTTGGTCTCATTCACATGGATGGGCCTAGAAGCA
TTCCATATGTACCTGGCCCTTGTCAAAGTATTTAATACTTACATCCGAAAATACATCCTTAAATTCTGCA
TTGTCGGTTGGGGGGTACCAGCTGTGGTTGTGACCATCATCCTGACTATATCCCCAGATAACTATGGGCT
TGGATCCTATGGGAAATTCCCCAATGGTTCACCGGATGACTTCTGCTGGATCAACAACAATGCAGTATTC
TACATTACGGTGGTGGGATATTTCTGTGTGATATTTTTGCTGAACGTCAGCATGTTCATTGTGGTCCTGG
TTCAGCTCTGTCGAATTAAAAAGAAGAAGCAACTGGGAGCCCAGCGAAAAACCAGTATTCAAGACCTCAG
GAGTATCGCTGGCCTTACATTTTTACTGGGAATAACTTGGGGCTTTGCCTTCTTTGCCTGGGGACCAGTT
AACGTGACCTTCATGTATCTGTTTGCCATCTTTAATACCTTACAAGGATTTTTCATATTCATCTTTTACT
GTGTGGCCAAAGAAAATGTCAGGAAGCAATGGAGGCGGTATCTTTGTTGTGGAAAGTTACGGCTGGCTGA
AAATTCTGACTGGAGTAAAACTGCTACTAATGGTTTAAAGAAGCAGACTGTAAACCAAGGAGTGTCCAGC
TCTTCAAATTCCTTACAGTCAAGCAGTAACTCCACTAACTCCACCACACTGCTAGTGAATAATGATTGCT
CAGTACACGCAAGCGGGAATGGAAATGCTTCTACAGAGAGGAATGGGGTCTCTTTTAGTGTTCAGAATGG
AGATGTGTGCCTTCACGATTTCACTGGAAAACAGCACATGTTTAACGAGAAGGAAGATTCCTGCAATGGG
AAAGGCCGTATGGCTCTCAGAAGGACTTCAAAGCGGGGAAGCTTACACTTTATTGAGCAAATGTGA

Translation (1001 aa):
MVFSVRQCGHVGRTEEVLLTFKIFLVIICLHVVLVTSLEEDTDNSSLSPPPEVETTSLNDVTLSLLPSNE
TEKTKITIVKTFNASGVKPQRNICNLSSICNDSAFFRGEIMFQYDKESTVPQNQHITNGTLTGVLSLSEL
KRSELNKTLQTLSETYFIMCATAEAQSTLNCTFTIKLNNTMNACAVIAALERVKIRPMEHCCCSVRIPCP
SSPEELEKLQCDLQDPIVCLADHPRGPPFSSSQSIPVVPRATVLSQVPKATSFAEPPDYSPVTHNVPSPI
GEIQPLSPQPSAPIASSPAIDMPPQSETISSPMPQTHVSGTPPPVKASFSSPTVSAPANVNTTSAPPVQT
DIVNTSSISDLENQVLQMEKALSLGSLEPNLAGEMINQVSRLLHSPPDMLAPLAQRLLKVVDDIGLQLNF
SNTTISLTSPSLALAVIRVNASSFNTTTFVAQDPANLQVSLETQAPENSIGTITLPSSLMNNLPAHDMEL
ASRVQFNFFETPALFQDPSLENLSLISYVISSSVANLTVRNLTRNVTVTLKHINPSQDELTVRCVFWDLG
RNGGRGGWSDNGCSVKDRRLNETICTCSHLTSFGVLLDLSRTSVLPAQMMALTFITYIGCGLSSIFLSVT
LVTYIAFEKIRRDYPSKILIQLCAALLLLNLVFLLDSWIALYKMQGLCISVAVFLHYFLLVSFTWMGLEA
FHMYLALVKVFNTYIRKYILKFCIVGWGVPAVVVTIILTISPDNYGLGSYGKFPNGSPDDFCWINNNAVF
YITVVGYFCVIFLLNVSMFIVVLVQLCRIKKKKQLGAQRKTSIQDLRSIAGLTFLLGITWGFAFFAWGPV
NVTFMYLFAIFNTLQGFFIFIFYCVAKENVRKQWRRYLCCGKLRLAENSDWSKTATNGLKKQTVNQGVSS
SSNSLQSSSNSTNSTTLLVNNDCSVHASGNGNASTERNGVSFSVQNGDVCLHDFTGKQHMFNEKEDSCNG
KGRMALRRTSKRGSLHFIEQM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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