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Report for CCDS55376.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55376.1 Public Homo sapiens X ADGRG2 24 110 108 CCDS HistoryNCBI Gene:10149Re-query CCDS DB by CCDS ID:55376.1Re-query CCDS DB by GeneID:10149See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 55376.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000379876.5 ENSP00000369205.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000379876.5Link to Ensembl Protein Viewer:ENSP00000369205.1Re-query CCDS DB by Nucleotide ID:ENST00000379876Re-query CCDS DB by Protein ID:ENSP00000369205
Original member Current member NCBI NM_001184836.2 NP_001171765.1 Accepted alive Link to Nucleotide Sequence:NM_001184836.2Link to Protein Sequence:NP_001171765.1Re-query CCDS DB by Nucleotide ID:NM_001184836Re-query CCDS DB by Protein ID:NP_001171765Link to BLAST:NP_001171765.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001171765.1 993 Q8IZP9-5 993 100% 0 0

Chromosomal Locations for CCDS 55376.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 18990864 18991048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 18994896 18995048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 18996051 18996152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 18998996 18999279 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 18999861 18999960 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19002846 19003114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19004758 19004879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19006002 19006105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19006220 19006265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19007235 19007357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19007980 19008123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19009626 19009782 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19010613 19010778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19013686 19014074 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19019599 19019665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19021104 19021198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19023416 19023453 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19023909 19023948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19027219 19027274 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19028183 19028238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19030984 19031037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19033613 19033654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19035942 19035977 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19040189 19040224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19068717 19068834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2982 nt):
ATGGTTTTCTCTGTCAGGCAGTGTGGCCATGTTGGCAGAACTGAAGAAGTTTTACTGACGTTCAAGATAT
TCCTTGTCATCATTTGTCTTCATGTCGTTCTGGTAACATCCCTGGAAGAAGATACTGATAATTCCAGTTT
GTCACCACCACCTGATGTTACTTTAAGCTTACTCCCTTCAAACGAAACAGAAAAAACTAAAATCACTATA
GTAAAAACCTTCAATGCATCAGGCGTCAAACCCCAGAGAAATATCTGCAATTTGTCATCTATTTGCAATG
ACTCAGCATTTTTTAGAGGTGAGATCATGTTTCAATATGATAAAGAAAGCACTGTTCCCCAGAATCAACA
TATAACGAATGGCACCTTAACTGGAGTCCTGTCTCTAAGTGAATTAAAACGCTCAGAGCTCAACAAAACC
CTGCAAACCCTAAGTGAGACTTACTTTATAATGTGTGCTACAGCAGAGGCCCAAAGCACATTAAATTGTA
CATTCACAATAAAACTGAATAATACAATGAATGCATGTGCTGTAATAGCTGCTTTGGAAAGAGTAAAGAT
TCGACCAATGGAACACTGCTGCTGTTCTGTCAGGATACCCTGCCCTTCCTCCCCAGAAGAGTTGGAAAAG
CTTCAGTGTGACCTGCAGGATCCCATTGTCTGTCTTGCTGACCATCCACGTGGCCCACCATTTTCTTCCA
GCCAATCCATCCCAGTGGTGCCTCGGGCCACTGTGCTTTCCCAGGTCCCCAAAGCTACCTCTTTTGCTGA
GCCTCCAGATTATTCACCTGTGACCCACAATGTTCCCTCTCCAATAGGGGAGATTCAACCCCTTTCACCC
CAGCCTTCAGCTCCCATAGCTTCCAGCCCTGCCATTGACATGCCCCCACAGTCTGAAACGATCTCTTCCC
CTATGCCCCAAACCCATGTCTCCGGCACCCCACCTCCTGTGAAAGCCTCATTTTCCTCTCCCACCGTGTC
TGCCCCTGCGAATGTCAACACTACCAGCGCACCTCCTGTCCAGACAGACATCGTCAACACCAGCAGTATT
TCTGATCTTGAGAACCAAGTGTTGCAGATGGAGAAGGCTCTGTCCTTGGGCAGCCTGGAGCCTAACCTCG
CAGGAGAAATGATCAACCAAGTCAGCAGACTCCTTCATTCCCCGCCTGACATGCTGGCCCCTCTGGCTCA
AAGATTGCTGAAAGTAGTGGATGACATTGGCCTACAGCTGAACTTTTCAAACACGACTATAAGTCTAACC
TCCCCTTCTTTGGCTCTGGCTGTGATCAGAGTGAATGCCAGTAGTTTCAACACAACTACCTTTGTGGCCC
AAGACCCTGCAAATCTTCAGGTTTCTCTGGAAACCCAAGCTCCTGAGAACAGTATTGGCACAATTACTCT
TCCTTCATCGCTGATGAATAATTTACCAGCTCATGACATGGAGCTAGCTTCCAGGGTTCAGTTCAATTTT
TTTGAAACACCTGCTTTGTTTCAGGATCCTTCCCTGGAGAACCTCTCTCTGATCAGCTACGTCATATCAT
CGAGTGTTGCAAACCTGACCGTCAGGAACTTGACAAGAAACGTGACAGTCACATTAAAGCACATCAACCC
GAGCCAGGATGAGTTAACAGTGAGATGTGTATTTTGGGACTTGGGCAGAAATGGTGGCAGAGGAGGCTGG
TCAGACAATGGCTGCTCTGTCAAAGACAGGAGATTGAATGAAACCATCTGTACCTGTAGCCATCTAACAA
GCTTCGGCGTTCTGCTGGACCTATCTAGGACATCTGTGCTGCCTGCTCAAATGATGGCTCTGACGTTCAT
TACATATATTGGTTGTGGGCTTTCATCAATTTTTCTGTCAGTGACTCTTGTAACCTACATAGCTTTTGAA
AAGATCCGGAGGGATTACCCTTCCAAAATCCTCATCCAGCTGTGTGCTGCTCTGCTTCTGCTGAACCTGG
TCTTCCTCCTGGACTCGTGGATTGCTCTGTATAAGATGCAAGGCCTCTGCATCTCAGTGGCTGTATTTCT
TCATTATTTTCTCTTGGTCTCATTCACATGGATGGGCCTAGAAGCATTCCATATGTACCTGGCCCTTGTC
AAAGTATTTAATACTTACATCCGAAAATACATCCTTAAATTCTGCATTGTCGGTTGGGGGGTACCAGCTG
TGGTTGTGACCATCATCCTGACTATATCCCCAGATAACTATGGGCTTGGATCCTATGGGAAATTCCCCAA
TGGTTCACCGGATGACTTCTGCTGGATCAACAACAATGCAGTATTCTACATTACGGTGGTGGGATATTTC
TGTGTGATATTTTTGCTGAACGTCAGCATGTTCATTGTGGTCCTGGTTCAGCTCTGTCGAATTAAAAAGA
AGAAGCAACTGGGAGCCCAGCGAAAAACCAGTATTCAAGACCTCAGGAGTATCGCTGGCCTTACATTTTT
ACTGGGAATAACTTGGGGCTTTGCCTTCTTTGCCTGGGGACCAGTTAACGTGACCTTCATGTATCTGTTT
GCCATCTTTAATACCTTACAAGGATTTTTCATATTCATCTTTTACTGTGTGGCCAAAGAAAATGTCAGGA
AGCAATGGAGGCGGTATCTTTGTTGTGGAAAGTTACGGCTGGCTGAAAATTCTGACTGGAGTAAAACTGC
TACTAATGGTTTAAAGAAGCAGACTGTAAACCAAGGAGTGTCCAGCTCTTCAAATTCCTTACAGTCAAGC
AGTAACTCCACTAACTCCACCACACTGCTAGTGAATAATGATTGCTCAGTACACGCAAGCGGGAATGGAA
ATGCTTCTACAGAGAGGAATGGGGTCTCTTTTAGTGTTCAGAATGGAGATGTGTGCCTTCACGATTTCAC
TGGAAAACAGCACATGTTTAACGAGAAGGAAGATTCCTGCAATGGGAAAGGCCGTATGGCTCTCAGAAGG
ACTTCAAAGCGGGGAAGCTTACACTTTATTGAGCAAATGTGA

Translation (993 aa):
MVFSVRQCGHVGRTEEVLLTFKIFLVIICLHVVLVTSLEEDTDNSSLSPPPDVTLSLLPSNETEKTKITI
VKTFNASGVKPQRNICNLSSICNDSAFFRGEIMFQYDKESTVPQNQHITNGTLTGVLSLSELKRSELNKT
LQTLSETYFIMCATAEAQSTLNCTFTIKLNNTMNACAVIAALERVKIRPMEHCCCSVRIPCPSSPEELEK
LQCDLQDPIVCLADHPRGPPFSSSQSIPVVPRATVLSQVPKATSFAEPPDYSPVTHNVPSPIGEIQPLSP
QPSAPIASSPAIDMPPQSETISSPMPQTHVSGTPPPVKASFSSPTVSAPANVNTTSAPPVQTDIVNTSSI
SDLENQVLQMEKALSLGSLEPNLAGEMINQVSRLLHSPPDMLAPLAQRLLKVVDDIGLQLNFSNTTISLT
SPSLALAVIRVNASSFNTTTFVAQDPANLQVSLETQAPENSIGTITLPSSLMNNLPAHDMELASRVQFNF
FETPALFQDPSLENLSLISYVISSSVANLTVRNLTRNVTVTLKHINPSQDELTVRCVFWDLGRNGGRGGW
SDNGCSVKDRRLNETICTCSHLTSFGVLLDLSRTSVLPAQMMALTFITYIGCGLSSIFLSVTLVTYIAFE
KIRRDYPSKILIQLCAALLLLNLVFLLDSWIALYKMQGLCISVAVFLHYFLLVSFTWMGLEAFHMYLALV
KVFNTYIRKYILKFCIVGWGVPAVVVTIILTISPDNYGLGSYGKFPNGSPDDFCWINNNAVFYITVVGYF
CVIFLLNVSMFIVVLVQLCRIKKKKQLGAQRKTSIQDLRSIAGLTFLLGITWGFAFFAWGPVNVTFMYLF
AIFNTLQGFFIFIFYCVAKENVRKQWRRYLCCGKLRLAENSDWSKTATNGLKKQTVNQGVSSSSNSLQSS
SNSTNSTTLLVNNDCSVHASGNGNASTERNGVSFSVQNGDVCLHDFTGKQHMFNEKEDSCNGKGRMALRR
TSKRGSLHFIEQM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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