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Report for CCDS54311.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
54311.1 Public Homo sapiens 19 ZNF701 24 110 108 CCDS HistoryNCBI Gene:55762Re-query CCDS DB by CCDS ID:54311.1Re-query CCDS DB by GeneID:55762See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 54311.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000301093.6 ENSP00000301093.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000301093.6Link to Ensembl Protein Viewer:ENSP00000301093.2Re-query CCDS DB by Nucleotide ID:ENST00000301093Re-query CCDS DB by Protein ID:ENSP00000301093
Original member Current member EBI ENST00000540331.1 ENSP00000444339.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000540331.1Link to Ensembl Protein Viewer:ENSP00000444339.1Re-query CCDS DB by Nucleotide ID:ENST00000540331Re-query CCDS DB by Protein ID:ENSP00000444339
Original member Current member NCBI NM_001172655.1 NP_001166126.1 Accepted alive Link to Nucleotide Sequence:NM_001172655.1Link to Protein Sequence:NP_001166126.1Re-query CCDS DB by Nucleotide ID:NM_001172655Re-query CCDS DB by Protein ID:NP_001166126Link to BLAST:NP_001166126.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001166126.1 531 Q9NV72-1 531 100% 0 0

Chromosomal Locations for CCDS 54311.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 52572242 52572368 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 52574077 52574162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 52575895 52576021 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 52582202 52583457 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1596 nt):
ATGGGGTTTCTCCATGTTGGTCAGGATGGTCTCGAACTCCCGACATCAGGTGATCCGCCTGCCTCGGCCT
CCCAAAGTGCTGGGATTACAGGTGTGAGCCACCGCACTCAGCCTCCCTGTTTTGAAGGATTGACTTCTAA
AGACTTGGTACGTGAGGAAAAAACACGGAAGAGGAAGAGGAAAGCAAAGGAGTCAGGGATGGCTCTTCTT
CAGGGTCTACTGACATTCAGGGATGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAATGCCTGGACCCTG
CTCAGAGGACTCTATACAGAGACGTGATGCTGGAGAATTATAGGAACCTGGTCTCCCTGGATACCTCTTC
CAAATGCATGATGAAGATGTTCTCATCAACAGGACAAGGCAATACAGAAGTGGTCCACACAGGGACATTG
CAAATACATGCAAGTCATCACATTGGAGATACTTGCTTCCAGGAAATTGAGAAAGATATTCATGACTTTG
TGTTTCAGTGGCAAGAAAATGAAACAAATGGCCATGAAGCACTCATGACAAAAACCAAAAAGTTGATGAG
TAGTACAGAGCGACATGATCAAAGGCATGCTGGAAACAAACCTATTAAAAATGAGCTTGGATCAAGCTTT
CATTCGCATCTGCCTGAAGTGCACATATTTCACCCCGAAGGGAAAATTGGTAATCAAGTTGAGAAGGCTA
TCAACGATGCTTTCTCAGTTTCAGCATCCCAACGAATTTCCTGTAGGCCAAAAACTCGTATTTCTAATAA
GTATAGGAATAATTTCCTCCAGTCTTCATTACTCACACAAAAACGGGAAGTACACACAAGAGAAAAATCT
TTCCAACGTAATGAGAGTGGCAAAGCCTTTAATGGTAGCTCACTCTTAAAAAAACATCAGATAATCCATT
TAGGAGACAAACAGTATAAATGTGATGTATGCGGCAAGGACTTTCATCAGAAGCGATACCTTGCATGCCA
TAGATGTCACACTGGTGAGAATCCTTACACGTGTAATGAGTGTGGCAAGACATTCAGTCACAATTCAGCC
CTGTTAGTTCACAAGGCAATTCATACTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGTTTTTA
ATCAACAATCAAACCTTGCACGTCATCATAGAGTTCATACTGGAGAGAAACCTTACAAATGTGAAGAATG
TGACAAAGTTTTCAGTCGCAAATCACACCTTGAAAGACATAGGAGAATTCACACTGGAGAGAAACCATAC
AAATGTAAGGTTTGTGACAAGGCTTTCAGACGTGATTCACACCTGGCACAACATACTGTAATTCACACTG
GAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTTGTTCAAAATTCATCTCTTGTAATGCATAA
GGTCATTCATACTGGAGAGAAACGTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCACAAATCAAAC
CTTGCATGTCATCGTAGACTTCATACTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGTTTTTA
ATCGAAAATCAAACCTTGAACGTCATCATAGACTTCATACTGGAAAGAAATCTTAG

Translation (531 aa):
MGFLHVGQDGLELPTSGDPPASASQSAGITGVSHRTQPPCFEGLTSKDLVREEKTRKRKRKAKESGMALL
QGLLTFRDVAIEFSQEEWKCLDPAQRTLYRDVMLENYRNLVSLDTSSKCMMKMFSSTGQGNTEVVHTGTL
QIHASHHIGDTCFQEIEKDIHDFVFQWQENETNGHEALMTKTKKLMSSTERHDQRHAGNKPIKNELGSSF
HSHLPEVHIFHPEGKIGNQVEKAINDAFSVSASQRISCRPKTRISNKYRNNFLQSSLLTQKREVHTREKS
FQRNESGKAFNGSSLLKKHQIIHLGDKQYKCDVCGKDFHQKRYLACHRCHTGENPYTCNECGKTFSHNSA
LLVHKAIHTGEKPYKCNECGKVFNQQSNLARHHRVHTGEKPYKCEECDKVFSRKSHLERHRRIHTGEKPY
KCKVCDKAFRRDSHLAQHTVIHTGEKPYKCNECGKTFVQNSSLVMHKVIHTGEKRYKCNECGKVFNHKSN
LACHRRLHTGEKPYKCNECGKVFNRKSNLERHHRLHTGKKS


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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