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Report for CCDS48011.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48011.1 Public Homo sapiens 9 GSN 24 110 108 CCDS HistoryNCBI Gene:2934Re-query CCDS DB by CCDS ID:48011.1Re-query CCDS DB by GeneID:2934See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 48011.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000373808.8 ENSP00000362914.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000373808.8Link to Ensembl Protein Viewer:ENSP00000362914.3Re-query CCDS DB by Nucleotide ID:ENST00000373808Re-query CCDS DB by Protein ID:ENSP00000362914
Original member Current member NCBI NM_001127666.2 NP_001121138.1 Accepted alive Link to Nucleotide Sequence:NM_001127666.2Link to Protein Sequence:NP_001121138.1Re-query CCDS DB by Nucleotide ID:NM_001127666Re-query CCDS DB by Protein ID:NP_001121138Link to BLAST:NP_001121138.1
Original member Current member NCBI NM_001127667.2 NP_001121139.1 Accepted alive Link to Nucleotide Sequence:NM_001127667.2Link to Protein Sequence:NP_001121139.1Re-query CCDS DB by Nucleotide ID:NM_001127667Re-query CCDS DB by Protein ID:NP_001121139Link to BLAST:NP_001121139.1
Original member Current member NCBI NM_001353063.2 NP_001339992.1 Accepted alive Link to Nucleotide Sequence:NM_001353063.2Link to Protein Sequence:NP_001339992.1Re-query CCDS DB by Nucleotide ID:NM_001353063Re-query CCDS DB by Protein ID:NP_001339992Link to BLAST:NP_001339992.1
Original member Current member NCBI NM_001353064.2 NP_001339993.1 Accepted alive Link to Nucleotide Sequence:NM_001353064.2Link to Protein Sequence:NP_001339993.1Re-query CCDS DB by Nucleotide ID:NM_001353064Re-query CCDS DB by Protein ID:NP_001339993Link to BLAST:NP_001339993.1
Original member Current member NCBI NM_001353065.2 NP_001339994.1 Accepted alive Link to Nucleotide Sequence:NM_001353065.2Link to Protein Sequence:NP_001339994.1Re-query CCDS DB by Nucleotide ID:NM_001353065Re-query CCDS DB by Protein ID:NP_001339994Link to BLAST:NP_001339994.1
Original member Current member NCBI NM_001353066.2 NP_001339995.1 Accepted alive Link to Nucleotide Sequence:NM_001353066.2Link to Protein Sequence:NP_001339995.1Re-query CCDS DB by Nucleotide ID:NM_001353066Re-query CCDS DB by Protein ID:NP_001339995Link to BLAST:NP_001339995.1
Original member Current member NCBI NM_001353067.2 NP_001339996.1 Accepted alive Link to Nucleotide Sequence:NM_001353067.2Link to Protein Sequence:NP_001339996.1Re-query CCDS DB by Nucleotide ID:NM_001353067Re-query CCDS DB by Protein ID:NP_001339996Link to BLAST:NP_001339996.1
Original member Current member NCBI NM_001353068.2 NP_001339997.1 Accepted alive Link to Nucleotide Sequence:NM_001353068.2Link to Protein Sequence:NP_001339997.1Re-query CCDS DB by Nucleotide ID:NM_001353068Re-query CCDS DB by Protein ID:NP_001339997Link to BLAST:NP_001339997.1
Original member Current member NCBI NM_001353069.2 NP_001339998.1 Accepted alive Link to Nucleotide Sequence:NM_001353069.2Link to Protein Sequence:NP_001339998.1Re-query CCDS DB by Nucleotide ID:NM_001353069Re-query CCDS DB by Protein ID:NP_001339998Link to BLAST:NP_001339998.1
Original member Current member NCBI NM_001353070.2 NP_001339999.1 Accepted alive Link to Nucleotide Sequence:NM_001353070.2Link to Protein Sequence:NP_001339999.1Re-query CCDS DB by Nucleotide ID:NM_001353070Re-query CCDS DB by Protein ID:NP_001339999Link to BLAST:NP_001339999.1
Original member Current member NCBI NM_001353071.2 NP_001340000.1 Accepted alive Link to Nucleotide Sequence:NM_001353071.2Link to Protein Sequence:NP_001340000.1Re-query CCDS DB by Nucleotide ID:NM_001353071Re-query CCDS DB by Protein ID:NP_001340000Link to BLAST:NP_001340000.1
Original member Current member NCBI NM_001353072.2 NP_001340001.1 Accepted alive Link to Nucleotide Sequence:NM_001353072.2Link to Protein Sequence:NP_001340001.1Re-query CCDS DB by Nucleotide ID:NM_001353072Re-query CCDS DB by Protein ID:NP_001340001Link to BLAST:NP_001340001.1
Original member Current member NCBI NM_001353073.2 NP_001340002.1 Accepted alive Link to Nucleotide Sequence:NM_001353073.2Link to Protein Sequence:NP_001340002.1Re-query CCDS DB by Nucleotide ID:NM_001353073Re-query CCDS DB by Protein ID:NP_001340002Link to BLAST:NP_001340002.1
Original member Current member NCBI NM_001353074.2 NP_001340003.1 Accepted alive Link to Nucleotide Sequence:NM_001353074.2Link to Protein Sequence:NP_001340003.1Re-query CCDS DB by Nucleotide ID:NM_001353074Re-query CCDS DB by Protein ID:NP_001340003Link to BLAST:NP_001340003.1
Original member Current member NCBI NM_001353075.1 NP_001340004.1 Accepted alive Link to Nucleotide Sequence:NM_001353075.1Link to Protein Sequence:NP_001340004.1Re-query CCDS DB by Nucleotide ID:NM_001353075Re-query CCDS DB by Protein ID:NP_001340004Link to BLAST:NP_001340004.1
Original member Current member NCBI NM_001353077.1 NP_001340006.1 Accepted alive Link to Nucleotide Sequence:NM_001353077.1Link to Protein Sequence:NP_001340006.1Re-query CCDS DB by Nucleotide ID:NM_001353077Re-query CCDS DB by Protein ID:NP_001340006Link to BLAST:NP_001340006.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001121138.1 742 P06396-3 742 100% 0 0
NP_001121139.1 742 P06396-3 742 100% 0 0
NP_001339992.1 742 P06396-3 742 100% 0 0
NP_001339993.1 742 P06396-3 742 100% 0 0
NP_001339994.1 742 P06396-3 742 100% 0 0
NP_001339995.1 742 P06396-3 742 100% 0 0
NP_001339996.1 742 P06396-3 742 100% 0 0
NP_001339997.1 742 P06396-3 742 100% 0 0
NP_001339998.1 742 P06396-3 742 100% 0 0
NP_001339999.1 742 P06396-3 742 100% 0 0
NP_001340000.1 742 P06396-3 742 100% 0 0
NP_001340001.1 742 P06396-3 742 100% 0 0
NP_001340002.1 742 P06396-3 742 100% 0 0
NP_001340003.1 742 P06396-3 742 100% 0 0
NP_001340004.1 742 P06396-3 742 100% 0 0
NP_001340006.1 742 P06396-3 742 100% 0 0

Chromosomal Locations for CCDS 48011.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 121300103 121300126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 121301963 121302167 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 121302911 121303065 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 121310684 121310845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 121312339 121312488 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 121313934 121314023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 121317086 121317218 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 121318406 121318494 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 121318665 121318880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 121321268 121321401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 121324554 121324644 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 121326512 121326682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 121327308 121327482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 121328891 121329015 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 121329238 121329315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 121331388 121331448 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 121332434 121332603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2229 nt):
ATGGAAAAACTGTTTTGTTGCTTTCCCAACAGCATGGTGGTGGAACACCCCGAGTTCCTCAAGGCAGGGA
AGGAGCCTGGCCTGCAGATCTGGCGTGTGGAGAAGTTCGATCTGGTGCCCGTGCCCACCAACCTTTATGG
AGACTTCTTCACGGGCGACGCCTACGTCATCCTGAAGACAGTGCAGCTGAGGAACGGAAATCTGCAGTAT
GACCTCCACTACTGGCTGGGCAATGAGTGCAGCCAGGATGAGAGCGGGGCGGCCGCCATCTTTACCGTGC
AGCTGGATGACTACCTGAACGGCCGGGCCGTGCAGCACCGTGAGGTCCAGGGCTTCGAGTCGGCCACCTT
CCTAGGCTACTTCAAGTCTGGCCTGAAGTACAAGAAAGGAGGTGTGGCATCAGGATTCAAGCACGTGGTA
CCCAACGAGGTGGTGGTGCAGAGACTCTTCCAGGTCAAAGGGCGGCGTGTGGTCCGTGCCACCGAGGTAC
CTGTGTCCTGGGAGAGCTTCAACAATGGCGACTGCTTCATCCTGGACCTGGGCAACAACATCCACCAGTG
GTGTGGTTCCAACAGCAATCGGTATGAAAGACTGAAGGCCACACAGGTGTCCAAGGGCATCCGGGACAAC
GAGCGGAGTGGCCGGGCCCGAGTGCACGTGTCTGAGGAGGGCACTGAGCCCGAGGCGATGCTCCAGGTGC
TGGGCCCCAAGCCGGCTCTGCCTGCAGGTACCGAGGACACCGCCAAGGAGGATGCGGCCAACCGCAAGCT
GGCCAAGCTCTACAAGGTCTCCAATGGTGCAGGGACCATGTCCGTCTCCCTCGTGGCTGATGAGAACCCC
TTCGCCCAGGGGGCCCTGAAGTCAGAGGACTGCTTCATCCTGGACCACGGCAAAGATGGGAAAATCTTTG
TCTGGAAAGGCAAGCAGGCAAACACGGAGGAGAGGAAGGCTGCCCTCAAAACAGCCTCTGACTTCATCAC
CAAGATGGACTACCCCAAGCAGACTCAGGTCTCGGTCCTTCCTGAGGGCGGTGAGACCCCACTGTTCAAG
CAGTTCTTCAAGAACTGGCGGGACCCAGACCAGACAGATGGCCTGGGCTTGTCCTACCTTTCCAGCCATA
TCGCCAACGTGGAGCGGGTGCCCTTCGACGCCGCCACCCTGCACACCTCCACTGCCATGGCCGCCCAGCA
CGGCATGGATGACGATGGCACAGGCCAGAAACAGATCTGGAGAATCGAAGGTTCCAACAAGGTGCCCGTG
GACCCTGCCACATATGGACAGTTCTATGGAGGCGACAGCTACATCATTCTGTACAACTACCGCCATGGTG
GCCGCCAGGGGCAGATAATCTATAACTGGCAGGGTGCCCAGTCTACCCAGGATGAGGTCGCTGCATCTGC
CATCCTGACTGCTCAGCTGGATGAGGAGCTGGGAGGTACCCCTGTCCAGAGCCGTGTGGTCCAAGGCAAG
GAGCCCGCCCACCTCATGAGCCTGTTTGGTGGGAAGCCCATGATCATCTACAAGGGCGGCACCTCCCGCG
AGGGCGGGCAGACAGCCCCTGCCAGCACCCGCCTCTTCCAGGTCCGCGCCAACAGCGCTGGAGCCACCCG
GGCTGTTGAGGTATTGCCTAAGGCTGGTGCACTGAACTCCAACGATGCCTTTGTTCTGAAAACCCCCTCA
GCCGCCTACCTGTGGGTGGGTACAGGAGCCAGCGAGGCAGAGAAGACGGGGGCCCAGGAGCTGCTCAGGG
TGCTGCGGGCCCAACCTGTGCAGGTGGCAGAAGGCAGCGAGCCAGATGGCTTCTGGGAGGCCCTGGGCGG
GAAGGCTGCCTACCGCACATCCCCACGGCTGAAGGACAAGAAGATGGATGCCCATCCTCCTCGCCTCTTT
GCCTGCTCCAACAAGATTGGACGTTTTGTGATCGAAGAGGTTCCTGGTGAGCTCATGCAGGAAGACCTGG
CAACGGATGACGTCATGCTTCTGGACACCTGGGACCAGGTCTTTGTCTGGGTTGGAAAGGATTCTCAAGA
AGAAGAAAAGACAGAAGCCTTGACTTCTGCTAAGCGGTACATCGAGACGGACCCAGCCAATCGGGATCGG
CGGACGCCCATCACCGTGGTGAAGCAAGGCTTTGAGCCTCCCTCCTTTGTGGGCTGGTTCCTTGGCTGGG
ATGATGATTACTGGTCTGTGGACCCCTTGGACAGGGCCATGGCTGAGCTGGCTGCCTGA

Translation (742 aa):
MEKLFCCFPNSMVVEHPEFLKAGKEPGLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGNLQY
DLHYWLGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVASGFKHVV
PNEVVVQRLFQVKGRRVVRATEVPVSWESFNNGDCFILDLGNNIHQWCGSNSNRYERLKATQVSKGIRDN
ERSGRARVHVSEEGTEPEAMLQVLGPKPALPAGTEDTAKEDAANRKLAKLYKVSNGAGTMSVSLVADENP
FAQGALKSEDCFILDHGKDGKIFVWKGKQANTEERKAALKTASDFITKMDYPKQTQVSVLPEGGETPLFK
QFFKNWRDPDQTDGLGLSYLSSHIANVERVPFDAATLHTSTAMAAQHGMDDDGTGQKQIWRIEGSNKVPV
DPATYGQFYGGDSYIILYNYRHGGRQGQIIYNWQGAQSTQDEVAASAILTAQLDEELGGTPVQSRVVQGK
EPAHLMSLFGGKPMIIYKGGTSREGGQTAPASTRLFQVRANSAGATRAVEVLPKAGALNSNDAFVLKTPS
AAYLWVGTGASEAEKTGAQELLRVLRAQPVQVAEGSEPDGFWEALGGKAAYRTSPRLKDKKMDAHPPRLF
ACSNKIGRFVIEEVPGELMQEDLATDDVMLLDTWDQVFVWVGKDSQEEEKTEALTSAKRYIETDPANRDR
RTPITVVKQGFEPPSFVGWFLGWDDDYWSVDPLDRAMAELAA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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