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Report for CCDS47722.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47722.1 Public Homo sapiens 7 TMEM213 24 110 108 CCDS HistoryNCBI Gene:155006Re-query CCDS DB by CCDS ID:47722.1Re-query CCDS DB by GeneID:155006See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47722.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000442682.7 ENSP00000390407.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000442682.7Link to Ensembl Protein Viewer:ENSP00000390407.2Re-query CCDS DB by Nucleotide ID:ENST00000442682Re-query CCDS DB by Protein ID:ENSP00000390407
Original member Current member NCBI NM_001085429.2 NP_001078898.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001085429.2Link to Protein Sequence:NP_001078898.1Re-query CCDS DB by Nucleotide ID:NM_001085429Re-query CCDS DB by Protein ID:NP_001078898Link to BLAST:NP_001078898.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001078898.1 107 A2RRL7-1 107 100% 0 0

Chromosomal Locations for CCDS 47722.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 138798105 138798186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 138801327 138801398 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 138802900 138803069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (324 nt):
ATGCAGCGCCTCCCCGCTGCCACCCGGGCCACCCTGATCCTCAGCCTGGCCTTTGCCTCCCTCCACTCGG
CTTGCTCGGCAGAAGCAAGCAGCAGCAACAGCTCAAGCTTGACCGCTCACCACCCAGACCCTGGGACCCT
GGAGCAGTGCCTCAACGTGGACTTCTGCCCACAAGCAGCCCGGTGCTGCCGCACAGGAGTGGACGAGTAC
GGCTGGATCGCGGCAGCTGTTGGCTGGAGCCTCTGGTTCCTCACCCTCATCCTGCTCTGTGTGGACAAAC
TGATGAAGCTGACTCCAGATGAGCCCAAGGACTTGCAAGCGTGA

Translation (107 aa):
MQRLPAATRATLILSLAFASLHSACSAEASSSNSSSLTAHHPDPGTLEQCLNVDFCPQAARCCRTGVDEY
GWIAAAVGWSLWFLTLILLCVDKLMKLTPDEPKDLQA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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