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Report for CCDS47552.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47552.1 Public Homo sapiens 7 PRPS1L1 24 110 108 CCDS HistoryNCBI Gene:221823Re-query CCDS DB by CCDS ID:47552.1Re-query CCDS DB by GeneID:221823See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)


Attributes
Non-AUG initiation codon

Sequence IDs included in CCDS 47552.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000506618.5 ENSP00000424595.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000506618.5Link to Ensembl Protein Viewer:ENSP00000424595.3Re-query CCDS DB by Nucleotide ID:ENST00000506618Re-query CCDS DB by Protein ID:ENSP00000424595
Original member Current member NCBI NM_175886.3 NP_787082.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_175886.3Link to Protein Sequence:NP_787082.1Re-query CCDS DB by Nucleotide ID:NM_175886Re-query CCDS DB by Protein ID:NP_787082Link to BLAST:NP_787082.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_787082.1 318 P21108 318 100% 0 0

Chromosomal Locations for CCDS 47552.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 18026826 18027782 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. This works on the replacement symbol in the Translation Exceptions section also.

Translation Exceptions:
replace the symbol T (codon ACG) with M at amino acid position 1

Nucleotide Sequence (957 nt):
ACGCCGAATATCAAAATCTTCAGCGGCAGCTCCCACCAGGACTTATCCCAGAAAATTGCTGACCGCCTGG
GCCTGGAGCTAGGCAAGGTGGTGACTAAGAAATTCAGCAACCAGGAGACCTGCGTGGAAATTGATGAGAG
TGTGCGTGGAGAGGATGTCTACATCGTTCAGAGTGGTTGTGGCGAAATCAACGACAGTCTAATGGAGCTT
TTGATCATGATTAATGCCTGCAAGATTGCTTCAGCTAGCCGAGTTACTGCAGTCATCCCATGCTTCCCTT
ATGCCCGACAGGATAAGAAGGATAAGAGCCGGTCCCCAATCTCTGCCAAGCTTGTTGCAAATATGCTCTC
TATAGCAGGTGCGGATCATATCATCACCATGGACCTACATGCTTCTCAAATTCAGGGCTTTTTTGATATC
CCAGTAGACAACTTGTATGCAGAGCCAACTGTCCTGAAGTGGATAAGGGAGAATATCCCTGAGTGGAAGA
ACTGCATTATTGTCTCGCCAGATGCTGGTGGAGCTAAAAGAGTGACCTCCATTGCAGACCAGTTGAATGT
GGACTTTGCTTTGATTCATAAAGAACGGAAGAAGGCCAATGAAGTGGACTGCATAGTGCTAGTGGGAGAT
GTGAATGATCGTGTGGCTATCCTTGTAGATGACATGGCAGACACTTGTGTTACAATCTGCCTCGCAGCTG
ACAAACTTCTCTCAGCTGGAGCAACCAGAGTTTATGCTATCTTGACTCATGGAATCTTTTCTGGCCCAGC
CATTTCTCGCATCAACACTGCATGCTTTGAAGCAGTGGTAGTCACCAATACCATACCTCAAGATGAGAAG
ATGAAGCATTGCTCCAAAATACGAGTAATTGACATCTCCATGATCCTTGCAGAAGCCATAAGGAGAACTC
ATAATGGGGAATCTGTTTCCTACCTGTTCAGCCATGTTCCTTTATAA

Translation (318 aa):
MPNIKIFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIDESVRGEDVYIVQSGCGEINDSLMEL
LIMINACKIASASRVTAVIPCFPYARQDKKDKSRSPISAKLVANMLSIAGADHIITMDLHASQIQGFFDI
PVDNLYAEPTVLKWIRENIPEWKNCIIVSPDAGGAKRVTSIADQLNVDFALIHKERKKANEVDCIVLVGD
VNDRVAILVDDMADTCVTICLAADKLLSAGATRVYAILTHGIFSGPAISRINTACFEAVVVTNTIPQDEK
MKHCSKIRVIDISMILAEAIRRTHNGESVSYLFSHVPL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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