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Report for CCDS47537.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47537.1 Public Homo sapiens 7 GRID2IP 24 110 108 CCDS HistoryNCBI Gene:392862Re-query CCDS DB by CCDS ID:47537.1Re-query CCDS DB by GeneID:392862See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47537.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000457091.3 ENSP00000397351.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000457091.3Link to Ensembl Protein Viewer:ENSP00000397351.2Re-query CCDS DB by Nucleotide ID:ENST00000457091Re-query CCDS DB by Protein ID:ENSP00000397351
Original member Current member NCBI NM_001145118.2 NP_001138590.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001145118.2Link to Protein Sequence:NP_001138590.1Re-query CCDS DB by Nucleotide ID:NM_001145118Re-query CCDS DB by Protein ID:NP_001138590Link to BLAST:NP_001138590.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001138590.1 1211 A4D2P6 1211 100% 0 0

Chromosomal Locations for CCDS 47537.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 6497774 6497845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6498064 6498228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6501781 6501899 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6501989 6502118 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6502786 6502872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6503008 6503163 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6503491 6503687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6504793 6504870 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6505820 6505907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6507985 6508401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6508958 6509313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6510283 6510400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6510609 6510706 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6510908 6511039 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6514375 6514529 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6520578 6520761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6521429 6521523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6521888 6521957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6526224 6526309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6526521 6526769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6539718 6539872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6551008 6551436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3636 nt):
ATGGCCACCACTGCCACGCCGGCCACGAACCAGGGCTGGCCAGAGGACTTTGGCTTCCGGCTAGGTGGCT
CTGGCCCCTGCTTCGTCCTGGAGGTGGCCAAGGGGAGCAGCGCGCATGCCGGAGGACTGCGGCCAGGAGA
CCAGATCCTGGAGGTGGAGGGGCTGGCGGTGGGCGGTCTGAGCCGCGAGCGCCTCGTGCGCCTGGCACGG
CGCTGCCCACGTGTGCCGCCCAGTCTGGGCGTGCTCCCGGCTCCCGACGGTGGCCCCGGCCCAGGATCCG
GCCCCGCGGCCCCGACCACAGTCTTGCGGGCCCCGCGGTGCGGCCGCGGCCTAGCTCTGGGCCGTGAGCT
GCTTCGCCTGGCCGGCCGCAAGCGCCCGGACGCGGTGCACCGAGAGCGCAGGCGCAAGGCCCAAGAGTTC
AGCCGCAAGGTGGATGAAATCTTGGGGGACCAGCCAACTGCCAAGGAGCAGGTGTTCGCTGCACTGAAGC
AGTTTGCAGCTGAGCAGCGGGTGGATGATCTGGTGTGGACTCTCACCCTGGCGCTGCCCCGAGAGGCCTG
CGGGCCACTCCTGGACAACCTCAGGATCTTCATCCCCAAGAAGCACCGGGCGCGCTTCGACGAGGTGGTG
TCTCAGGGCCTCCTGGGCAAGCTGTGCCGCGCACGCCGGGCCCAGGGCGCGCAGCGACTGCGCCGGAGCC
GCAGCGAGGAGCGGCCGGAGCGCCTCCTGGTGTCCACGCGCGCCAGCGCCCCGCCGCGCCGCCCCGATGA
GCCGCCCCCGCGCAGGGCCTCCTTGCTGGTGGGCGGCCTCGCCGGCCCCGGGGGCGCGCGCAGGACTGTC
CGAGTCTACAAAGGCAACAAGAGCTTCGGCTTCACACTTCGCGGCCACGGGCCTGTCTGGATCGAGTCTG
TCCTGCCTGGGAGCCCAGCTGACAATGCTGCCCTCAAGTCAGGTGACCGGATCCTCTTCCTCAATGGACT
GGACATGAGGAACTGCTCCCACGACAAGGTGGTGTCCATGCTGCAGGGCAGTGGTGCCATGCCCACGCTG
GTGGTGGAGGAAGGGCTCGTCCCATTTGCCAGTGACTCCGATTCTCTGGACTCACCCAACCCGTCGTCGG
CGCTCACCTCCCTGCAGTGGGTGGCGGAGATCCTGCCGTCCAGCATCCGGGTCCAAGGGAGGACCTTCAG
CCAGCAGCTGGAGCACCTACTCACACCTCCTGAGCGCTATGGGGTCTGCCGGGCCCTCGAGAGCTTCTTC
CAGCACAGGAACATCGACACCCTCATCGTTGACGTCTACCCTGTGCTGGACACCCCTGCCAAGCAGGTCC
TGTGGCAGTTCATCTACCAGCTGCTGACCTATGAGGAGCAGGAGCTCTGTCAGGAGAAAATCGCATGCTT
CCTGGGCTACACGGCCATGACAGCAGAGCCGGAGCCTGAGCTGGACCTGGAGTCCGAGCCCACGCCTGAG
CCCCAGCCGCGGAGCTCCCTGCGGGCTTCCTCCATGTGCCGCCGCAGCCTCCGGTCCCAGGGCCTGGAGG
CCGGCCTCAGCTGCGGTCCCAGCGAGTGCCCTGAGATGCCTCTTCCCCTGATCCCAGGCGAGCGCCAGGC
AGGCGACGGCACGTCCCTCCCTGAGACCCCCAACCCCAAGATGATGTCAGCCGTCTATGCAGAGCTTGAG
TCTCGACTGAACAGCAGCTTCAAAGGGAAGATGGGGACCGTGTCCAAATCCCGGGCTTCCCCTCCAGGCC
CCAGCCCAGCAGTCACCACAGGGCCCAGGACCCTGTCCGGCGTCTCATGGCCCAGCGAGCGACTCTTGCC
CTCCCCCTGCTACCACCCGCTGTGTTCGGGGGGTCTGGCCTCCCCCAGCAGCTCTGAGTCCCACCCCTAC
GCCAGCCTGGACAGCAGCAGGGCACCCTCCCCACAGCCAGGCCCCGGGCCCATCTGCCCCGACAGCCCCC
CAAGCCCGGACCCCACCCGCCCGCCCAGCCGCAGGAAGCTCTTCACCTTCTCCCACCCTGTGCGAAGCCG
CGATACTGACCGCTTCCTGGACGTGCTGAGCGAGCAGCTGGGCCCCCGGGTCACCATCGTGGATGATTTC
CTGACCCCGGAGAACGACTACGAGGAGATGAGCTTCCATGATGACCAGGGCAGCTTCGTAACCAATGAGC
GGAGCAGCGCCAGCGACTGCATCAGCAGCAGTGAAGAAGGCAGCTCCCTGACCTACTCCTCCATCTCTGA
CCACATCCCCCCACCCCCGCTCAGCCCCCCACCACCGCCACCCCTGCCTTTCCATGACGCTAAGCCCAGC
TCCCGCAGCTCTGATGGTTCCCGGGGCCCTGCTCAGGCGCTGGCCAAGCCCCTCACCCAACTCAGCCACC
CAGTCCCTCCACCACCCCCACCGCCCCTGCCCCCACCCGTGCCCTGTGCACCCCCCATGCTGTCCCGGGG
CCTGGGCCACCGGCGCAGTGAGACCAGCCACATGAGCGTCAAGCGCTTGCGGTGGGAACAGGTGGAGAAC
TCAGAAGGCACCATCTGGGGTCAGCTCGGGGAAGACTCTGACTACGATAAGCTGAGTGACATGGTGAAAT
ACCTCGACCTGGAGCTCCACTTCGGCACCCAGAAACCTGCTAAACCGGTGCCGGGGCCGGAGCCCTTCCG
GAAGAAGGAGGTGGTGGAGATCCTGTCCCATAAGAAGGCCTACAACACCTCCATCCTCTTGGCACACCTG
AAGCTGAGCCCCGCGGAGCTGCGCCAGGTGCTGATGAGCATGGAGCCCCGGCGCCTGGAGCCCGCACATC
TCGCGCAGCTGCTGCTCTTCGCGCCCGACGCCGACGAGGAGCAGCGCTACCAGGCCTTCCGCGAGGCGCC
CGGCCGCCTCAGCGAGCCGGACCAGTTCGTCCTGCAGATGCTGTCAGTTCCCGAATACAAGACACGCCTG
CGCAGCCTCCACTTCCAGGCCACCCTCCAGGAGAAGACAGAGGAGATCCGAGGCAGCCTTGAATGCTTGC
GCCAGGCCTCCCTGGAGCTCAAAAACAGTCGGAAGCTCGCCAAGATCCTGGAGTTTGTGTTGGCCATGGG
CAACTATCTCAACGATGGACAGCCCAAAACCAACAAGACTACGGGCTTCAAGATCAACTTTCTGACAGAG
CTGAACTCCACCAAGACAGTGGATGGGAAGTCCACCTTCCTGCACATCCTTGCCAAATCGCTGAGCCAGC
ACTTCCCTGAACTCCTGGGCTTTGCTCAGGACCTGCCCACCGTGCCCCTGGCTGCCAAAGTGAACCAACG
GGCCCTGACCAGTGACCTGGCTGACCTCCATGGCACTATCAGCGAGATACAGGATGCCTGCCAGAGCATT
TCCCCCTCTAGCGAGGACAAGTTTGCAATGGTCATGTCGTCCTTCCTGGAGACGGCCCAGCCAGCACTTC
GGGCGCTCGACGGGCTGCAGCGCGAGGCCATGGAGGAGCTGGGCAAGGCGCTGGCCTTCTTTGGGGAGGA
TTCCAAGGCCACCACCTCTGAGGCTTTCTTCGGCATCTTTGCAGAGTTCATGAGCAAATTCGAGCGAGCG
CTGAGTGACCTGCAGGCCGGGGAGGGCCTGCGCAGCTCCGGGATGGTTTCACCCCTGGCCTGGTGA

Translation (1211 aa):
MATTATPATNQGWPEDFGFRLGGSGPCFVLEVAKGSSAHAGGLRPGDQILEVEGLAVGGLSRERLVRLAR
RCPRVPPSLGVLPAPDGGPGPGSGPAAPTTVLRAPRCGRGLALGRELLRLAGRKRPDAVHRERRRKAQEF
SRKVDEILGDQPTAKEQVFAALKQFAAEQRVDDLVWTLTLALPREACGPLLDNLRIFIPKKHRARFDEVV
SQGLLGKLCRARRAQGAQRLRRSRSEERPERLLVSTRASAPPRRPDEPPPRRASLLVGGLAGPGGARRTV
RVYKGNKSFGFTLRGHGPVWIESVLPGSPADNAALKSGDRILFLNGLDMRNCSHDKVVSMLQGSGAMPTL
VVEEGLVPFASDSDSLDSPNPSSALTSLQWVAEILPSSIRVQGRTFSQQLEHLLTPPERYGVCRALESFF
QHRNIDTLIVDVYPVLDTPAKQVLWQFIYQLLTYEEQELCQEKIACFLGYTAMTAEPEPELDLESEPTPE
PQPRSSLRASSMCRRSLRSQGLEAGLSCGPSECPEMPLPLIPGERQAGDGTSLPETPNPKMMSAVYAELE
SRLNSSFKGKMGTVSKSRASPPGPSPAVTTGPRTLSGVSWPSERLLPSPCYHPLCSGGLASPSSSESHPY
ASLDSSRAPSPQPGPGPICPDSPPSPDPTRPPSRRKLFTFSHPVRSRDTDRFLDVLSEQLGPRVTIVDDF
LTPENDYEEMSFHDDQGSFVTNERSSASDCISSSEEGSSLTYSSISDHIPPPPLSPPPPPPLPFHDAKPS
SRSSDGSRGPAQALAKPLTQLSHPVPPPPPPPLPPPVPCAPPMLSRGLGHRRSETSHMSVKRLRWEQVEN
SEGTIWGQLGEDSDYDKLSDMVKYLDLELHFGTQKPAKPVPGPEPFRKKEVVEILSHKKAYNTSILLAHL
KLSPAELRQVLMSMEPRRLEPAHLAQLLLFAPDADEEQRYQAFREAPGRLSEPDQFVLQMLSVPEYKTRL
RSLHFQATLQEKTEEIRGSLECLRQASLELKNSRKLAKILEFVLAMGNYLNDGQPKTNKTTGFKINFLTE
LNSTKTVDGKSTFLHILAKSLSQHFPELLGFAQDLPTVPLAAKVNQRALTSDLADLHGTISEIQDACQSI
SPSSEDKFAMVMSSFLETAQPALRALDGLQREAMEELGKALAFFGEDSKATTSEAFFGIFAEFMSKFERA
LSDLQAGEGLRSSGMVSPLAW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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