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Report for CCDS47216.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47216.1 Public Homo sapiens 5 KIF2A 24 110 108 CCDS HistoryNCBI Gene:3796Re-query CCDS DB by CCDS ID:47216.1Re-query CCDS DB by GeneID:3796See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47216.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000407818.8 ENSP00000385000.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000407818.8Link to Ensembl Protein Viewer:ENSP00000385000.3Re-query CCDS DB by Nucleotide ID:ENST00000407818Re-query CCDS DB by Protein ID:ENSP00000385000
Original member Current member NCBI NM_001098511.3 NP_001091981.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001098511.3Link to Protein Sequence:NP_001091981.1Re-query CCDS DB by Nucleotide ID:NM_001098511Re-query CCDS DB by Protein ID:NP_001091981Link to BLAST:NP_001091981.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001091981.1 744 O00139-4 744 100% 0 0

Chromosomal Locations for CCDS 47216.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 62306473 62306536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 62347130 62347224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 62348048 62348167 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 62350066 62350120 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 62352588 62352710 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 62353275 62353375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 62355159 62355254 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 62357691 62357745 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 62358137 62358299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 62361242 62361332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 62361466 62361529 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 62362450 62362541 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 62363178 62363320 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 62363695 62363899 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 62365243 62365353 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 62366414 62366481 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 62372438 62372551 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 62373687 62373837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 62377661 62377762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 62381118 62381253 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 62385484 62385569 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2235 nt):
ATGGCAACGGCCAACTTCGGCAAGATCCAGATCGGGATTTACGTGGAGATCAAGCGCAGCGATGGCCGAA
TACATCAAGCAATGGTAACATCTTTAAATGAAGATAATGAAAGTGTAACTGTTGAATGGATAGAAAATGG
AGATACAAAAGGCAAAGAGATTGACCTGGAGAGCATCTTTTCACTTAACCCTGACCTTGTTCCTGATGAA
GAAATTGAACCCAGTCCAGAAACACCTCCACCTCCAGCATCCTCAGCCAAAGTAAACAAAATTGTAAAGA
ATCGACGGACTGTAGCTTCTATTAAGAATGACCCTCCTTCAAGAGATAATAGAGTGGTTGGTTCAGCACG
TGCACGGCCCAGTCAATTTCCTGAACAGTCTTCCTCTGCACAACAGAATGGTAGTGTTTCAGATATATCT
CCAGTTCAAGCTGCAAAAAAGGAATTTGGACCCCCTTCACGTAGAAAATCTAATTGTGTGAAAGAAGTAG
AAAAACTGCAAGAAAAACGAGAGAAAAGGAGATTGCAACAGCAAGAACTTAGAGAAAAAAGAGCCCAGGA
CGTTGATGCTACAAACCCAAATTATGAAATTATGTGTATGATCAGAGACTTTAGAGGAAGTTTGGATTAT
AGACCATTAACAACAGCAGATCCTATTGATGAACATAGGATATGTGTGTGTGTAAGAAAACGACCACTCA
ATAAAAAAGAAACTCAAATGAAAGATCTTGATGTAATCACAATTCCTAGTAAAGATGTTGTGATGGTACA
TGAACCAAAACAAAAAGTAGATTTAACAAGGTACCTAGAAAACCAAACATTTCGTTTTGATTATGCCTTT
GATGACTCAGCTCCTAATGAAATGGTTTACAGGTTTACTGCTAGACCACTAGTGGAAACTATATTTGAAA
GGGGAATGGCTACATGCTTTGCTTATGGGCAGACTGGAAGTGGAAAAACTCATACTATGGGTGGTGACTT
TTCAGGAAAGAACCAAGATTGTTCTAAAGGAATTTATGCATTAGCAGCTCGAGATGTCTTTTTAATGCTA
AAGAAGCCAAACTATAAGAAGCTAGAACTTCAAGTATATGCAACCTTCTTTGAAATTTATAGTGGAAAGG
TGTTTGACTTGCTAAACAGGAAAACAAAATTAAGAGTTCTAGAAGATGGAAAACAGCAGGTTCAAGTGGT
GGGATTACAGGAACGGGAGGTCAAATGTGTTGAAGATGTACTGAAACTCATTGACATAGGCAACAGTTGC
AGAACATCCGGTCAAACATCTGCAAATGCACATTCATCTCGGAGCCATGCAGTGTTTCAGATTATTCTTA
GAAGGAAAGGAAAACTACATGGCAAATTTTCTCTCATTGATTTGGCTGGAAATGAAAGAGGAGCTGATAC
TTCCAGTGCGGACAGGCAAACTAGGCTTGAAGGTGCTGAAATTAATAAAAGCCTTTTAGCACTCAAGGAG
TGCATCAGAGCCTTAGGTAGAAATAAACCTCATACTCCTTTCCGTGCAAGTAAACTCACTCAGGTGTTAA
GAGATTCTTTCATAGGTGAAAACTCTCGTACCTGCATGATTGCCACAATCTCTCCAGGAATGGCATCCTG
TGAAAATACTCTTAATACATTAAGATATGCAAATAGAGTAAAGGAGTTTGGAATTAGTCCATCAGACATT
CCCTTCTCACAGGGTAGTGGCAGTCGCCCTGATCTCTCTCCTTCTTATGAATATGACGACTTTTCTCCTT
CAGTTACCAGGGTCAAAGAATTGACTGTAGATCCAACTGCTGCTGGTGATGTTCGTCCAATAATGCACCA
TCCACCAAACCAGATTGATGACTTAGAGACACAGTGGGGTGTGGGGAGTTCCCCTCAGAGAGATGATCTA
AAACTTCTTTGTGAACAAAATGAAGAAGAAGTCTCTCCACAGTTGTTTACTTTCCACGAAGCTGTTTCAC
AAATGGTAGAAATGGAAGAACAAGTTGTAGAAGATCACAGGGCAGTGTTCCAGGAATCTATTCGGTGGTT
AGAAGATGAAAAGGCCCTCTTAGAGATGACTGAAGAAGTAGATTATGATGTCGATTCATATGCTACACAA
CTTGAAGCTATTCTTGAGCAAAAAATAGACATTTTAACTGAACTGCGGGATAAAGTGAAATCTTTCCGTG
CAGCTCTACAAGAGGAGGAACAAGCCAGCAAGCAAATCAACCCGAAGAGACCCCGTGCCCTTTAA

Translation (744 aa):
MATANFGKIQIGIYVEIKRSDGRIHQAMVTSLNEDNESVTVEWIENGDTKGKEIDLESIFSLNPDLVPDE
EIEPSPETPPPPASSAKVNKIVKNRRTVASIKNDPPSRDNRVVGSARARPSQFPEQSSSAQQNGSVSDIS
PVQAAKKEFGPPSRRKSNCVKEVEKLQEKREKRRLQQQELREKRAQDVDATNPNYEIMCMIRDFRGSLDY
RPLTTADPIDEHRICVCVRKRPLNKKETQMKDLDVITIPSKDVVMVHEPKQKVDLTRYLENQTFRFDYAF
DDSAPNEMVYRFTARPLVETIFERGMATCFAYGQTGSGKTHTMGGDFSGKNQDCSKGIYALAARDVFLML
KKPNYKKLELQVYATFFEIYSGKVFDLLNRKTKLRVLEDGKQQVQVVGLQEREVKCVEDVLKLIDIGNSC
RTSGQTSANAHSSRSHAVFQIILRRKGKLHGKFSLIDLAGNERGADTSSADRQTRLEGAEINKSLLALKE
CIRALGRNKPHTPFRASKLTQVLRDSFIGENSRTCMIATISPGMASCENTLNTLRYANRVKEFGISPSDI
PFSQGSGSRPDLSPSYEYDDFSPSVTRVKELTVDPTAAGDVRPIMHHPPNQIDDLETQWGVGSSPQRDDL
KLLCEQNEEEVSPQLFTFHEAVSQMVEMEEQVVEDHRAVFQESIRWLEDEKALLEMTEEVDYDVDSYATQ
LEAILEQKIDILTELRDKVKSFRAALQEEEQASKQINPKRPRAL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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