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Report for CCDS46665.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46665.1 Public Homo sapiens 22 RIMBP3 24 110 108 CCDS HistoryNCBI Gene:85376Re-query CCDS DB by CCDS ID:46665.1Re-query CCDS DB by GeneID:85376See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46665.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000619918.1 ENSP00000483386.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000619918.1Link to Ensembl Protein Viewer:ENSP00000483386.1Re-query CCDS DB by Nucleotide ID:ENST00000619918Re-query CCDS DB by Protein ID:ENSP00000483386
Original member Current member NCBI NM_015672.2 NP_056487.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015672.2Link to Protein Sequence:NP_056487.1Re-query CCDS DB by Nucleotide ID:NM_015672Re-query CCDS DB by Protein ID:NP_056487Link to BLAST:NP_056487.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056487.1 1639 Q9UFD9 1639 100% 0 0

Chromosomal Locations for CCDS 46665.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 18606515 18611434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4920 nt):
ATGGCCAAGGACTCGCCCAGCCCCTTGGGCGCGTCGCCCAAGAAGCCGGGCTGCTCCAGCCCGGCGGCGG
CA
GTGCTGGAGAACCAGAGGCGGGAGCTGGAGAAGCTACGGGCGGAGCTGGAGGCGGAGCGGGCAGGCTG
G
CGGGCGGAACGGCGGCGCTTCGCTGCCCGGGAGCGCCAGCTGCGTGAGGAGGCCGAGCGGGAGCGGCGA
CAG
CTGGCTGACCGTCTGCGCTCCAAGTGGGAGGCACAGCGCAGCCGGGAGTTGCGGCAGCTGCAAGAGG
AG
ATGCAGCGGGAACGCGAGGCCGAGATCCGGCAGCTGCTGCGCTGGAAGGAGGCCGAGCAGCGGCAGCT
G
CAGCAGCTGCTGCACCGGGAGCGCGATGGCGTGGTGCGCCAAGCCCGGGAGCTGCAGCGCCAGCTGGCC
GAG
GAGCTGGTGAACCGCGGCCACTGTAGCCGCCCGGGGGCGTCCGAGGTTTCCGCGGCGCAGTGCCGCT
GT
CGCCTGCAGGAAGTGTTGGCGCAGCTTCGCTGGCAGACTGACGGCGAGCAGGCGGCGCGCATCCGCTA
T
CTGCAGGCGGCGCTGGAGGTGGAGCGCCAGCTCTTCCTCAAGTACATCCTGGCGCACTTCCGCGGGCAC
CCG
GCTTTGTCGGGATCACCGGACCCCCAAGCTGTGCATTCCTTGGAAGAACCGCTGCCCCAGACCTCCA
GC
GGCTCTTGCCACGCCCCCAAACCCGCCTGCCAACTCGGATCTCTAGACAGCCTGAGTGCTGAAGTCGG
T
GTGCGCTCCCGCTCGCTAGGCCTGGTGTCCTCTGCGTGCTCCAGCTCCCCAGACGGCCTGCTCTCCACG
CAC
GCCAGCTCCCTTGATTGCTTCGCACCTGCGTGTTCCCGCTCGCTTGACAGCACCCGGAGCCTCCCCA
AG
GCCTCCAAATCCGAGGAGCGGCCCTCCTCACCAGACACCTCCACCCCTGGCTCCCGGAGGCTCTCGCC
G
CCACCATCGCCACTCCCGCCGCCACCACCACCGTCAGCCCACAGGAAACTCAGCAACCCGCGGGGAGGA
GAA
GGCTCTGAGAGCCAGCCCTGCGAAGTCCTGACTCCCTCACCCCCGGGCCTGGGCCACCACGAGCTGA
TA
AAGCTGAACTGGCTGCTGGCCAAGGCGTTGTGGGTGCTGGCGCGCCGCTGTTATACCCTGCAAGCGGA
G
AACAAGCAGCTGCGGCGTGCAGGCTGCCCCTACCAGGCAGACGAGAAGGTGAAGCGGCTCAAGGTAAAG
CGC
GCGGAGCTGACCGGGCTCGCGCGGCGCCTAGCTGACCGCGCCCGCAAGCTGCAGGAGACCAACCTCC
GG
GCCGTGAGCGCGCCTATACCCGGCGAGAGTTGCGCCGGCCTGGAGCTGTGCCAAGTCTTTGCCCGCCA
G
CGCGCTCGGGACCTGTCGGAGCAGGCGAGCGCGCCGCTGGCCAAGGACAAGCAGATCGAAGAGCTGCGG
CAG
GAGTGCCACCTCCTGCAGGCGCGTGTCGCCTCGGGTCCCTGCAGCGACCTGCATACTGGAAGGGGCG
GC
CCCTGCACCCAGTGGCTCAACGTCAGAGACTTAGACCGCCTGCAGCGCGAGTCCCAGCGGGAAGTGCT
G
CGCCTGCAGAGGCAGTTGATGCTTCAGCAGGGCAACGGTGGCGCTTGGCCCGAGGCGGGCGGCCAGAGC
GCA
ACCTGCGAGGAGGTGCGACGGCAGATGCTGGCGCTGGAGCGCGAGCTGGACCAGCGGCGGCGCGAGT
GC
CAGGAGCTGGGCGCGCAGGCGGCCCCGGCGCGGCGACGTGGCGAGGAGGCCGAGACACAGCTGCAGGC
G
GCGCTGCTCAAAAACGCCTGGCTGGCGGAGGAGAATGGGCGGCTGCAGGCCAAGACCGACTGGGTGCGG
AAG
GTGGAGGCTGAGAATAGCGAAGTGCGCGGCCACCTGGGCCGCGCGTGTCAAGAGCGCGATGCCTCCG
GC
TTGATCGCCGAACAGCTGCTGCAGCAGGCGGCGCGCGGGCAGGACAGGCAGCAGCAGCTGCAACGCGA
C
CCGCAGAAGGCCCTGTGTGACCTCCATCCTTCCTGGAAGGAGATACAGGCGCTCCAGTGTCGGCCTGGT
CAC
CCTCCTGAACAGCCCTGGGAGACCAGTCAAATGCCGGAGTCCCAAGTTAAAGGTAGCAGAAGGCCCA
AG
TTCCACGCACGGCCTGAAGACTACGCAGTGTCACAGCCCAACAGAGACATACAGGAGAAAAGGGAAGC
C
TCCCTCGAGGAGAGCCCAGTTGCCCTTGGGGAGTCAGCCAGTGTCCCCCAAGTTTCAGAGACAGTCCCT
GCC
AGCCAACCTCTGTCCAAGAAAACCAGCTCCCAGTCAAACTCCTCCTCTGAGGGGTCGATGTGGGCCA
CC
GTGCCGTCCTCCCCTACTCTGGACAGGGACACAGCCAGTGAGGTGGATGACCTGGAGCCTGACAGCGT
G
TCCCTGGCCCTGGAAATGGGGGGCTCGGCGGCTCCTGCTGCCCCCAAGCTCAAGATCTTCATGGCTCAG
TAT
AACTACAACCCATTTGAGGGGCCCAATGATCACCCTGAGGGTGAGCTGCCCCTCACAGCTGGGGACT
AC
ATATATATCTTCGGGGACATGGATGAGGATGGCTTCTATGAGGGGGAGCTTGAGGATGGCCGGCGGGG
G
CTGGTGCCCTCCAACTTCGTGGAGCAGATTCCGGACAGCTACATCCCAGGCTGCCTGCCTGCCAAATCC
CCT
GATCTTGGCCCCAGTCAACTCCCAGCGGGGCAGGATGAAGCTCTGGAGGAAGACAGCTTATTATCTG
GG
AAAGCCCAGGGAGTGGTGGACAGAGGGCTGTGCCAGATGGTCAGGGTGGGCTCCAAGACAGAAGTAGC
A
ACAGAGATCCTGGATACCAAGACGGAAGCCTGCCAGCTGGGCTTGCTGCAGAGCATGGGGAAGCAGGGC
CTC
TCCAGACCCCTTCTGGGGACCAAAGGGGTGCTCCGTATGGCTCCCATGCAGCTACACCTGCAGAATG
TC
ACAGCCACATCAGCCAACATCACCTGGGTCTACAGCAGCCACCGCCACCCCCATGTGGTATATCTTGA
T
GACCGAGAGCATGCCCTGACCCCAGCGGGCGTGAGCTGCTACACCTTCCAGGGCCTGTGCCCCGGCACG
CAC
TACCGGGCGCGGGTGGAGGTGCGGCTGCCACGGGACTTGCTGCAGGTGTATTGGGGAACTATGTCCT
CC
ACCGTCACCTTCGACACACTCTTGGCAGGACCTCCCTACCCACCGCTGGATGTGCTGGTGGAGCGCCA
T
GCCTCGCCAGGTGTCCTGGTGGTCAGCTGGCTCCCTGTGACCATTGACTCAGCTGGGTCCTCCAATGGA
GTC
CAGGTCACCGGTTATGCTGTGTATGCAGATGGGCTTAAGGTTTGTGAGGTCGCCGATGCCACTGCTG
GG
AGCACCCTATTGGAATTCTCCCAGCTACAGGTGCCCCTCACGTGGCAGAAGGTCTCAGTGAGAACCAT
G
TCACTCTGTGGTGAGTCCCTGGATTCAGTGCCTGCTCAGATCCCCGAGGACTTCTTCATGTGTCACCGA
TGG
CCAGAGACTCCACCCTTTAGCTACACTTGTGGCGACCCATCCACCTACAGAGTCACCTTCCCCGTCT
GC
CCCCAGAAGCTGTCACTGGCTCCTCCGAGTGCCAAGGCCAGCCCCCACAACCCTGGAAGCTGCGGGGA
G
CCCCAGGCCAAGTTCCTAGAAGCATTCTTTGAAGAACCCCCAAGGAGGCAATCCCCAGTGTCCAACCTG
GGC
TCAGAAGGAGAATGTCCGAGTTCAGGGGCTGGCAGCCAAGCCCAGGAGCTTGCAGAGGCCTGGGAGG
GC
TGTAGAAAGGACCTGCTCTTTCAGAAGAGTCCCCAGAACCACAGGCCACCTTCAGTCAGTGACCAGCC
T
GGGGAGAAGGAAAATTGCTCCCAGCACATGGGCACCAGCAAAAGCCCTGCTCCAGGATTCATCCATCTA
CGC
ACCGAGTGTGGGCCCAGGAAAGAACCGTGTCAGGAAAAGGCTGCCCTTGAGAGGGTACTTCGGCAAA
AG
CAAGATGCCCAAGGGTTCACACCTCCCCAGCTGGGCGCCAGCCAACAGTATGCATCTGACTTCCATAA
C
GTTTTGAAGGAGGAGCAGGAGGCACTGTGCTTGGATCTGTGGGGCACAGAGAGGCGAGAGGAGAGGAGG
GAG
CCTGAGCCCCACAGCAGGCAAGGACAAGCTCTGGGGGTGAAGAGAGGGTGCCAGCTCCATGAGCCCA
GC
TCGGCACTGTGTCCAGCTCCATCCGCCAAAGTCATCAAGATGCCCAGGGGTGGCCCCCAACAGCTGGG
G
ACGGGGGCCAACACTCCAGCCAGGGTCTTTGTGGCCCTCTCTGATTACAACCCCCTGGTGATGTCTGCC
AAC
CTCAAGGCTGCAGAGGAGGAGCTGGTCTTCCAGAAAAGGCAGTTGCTAAGAGTGTGGGGCTCTCAGG
AC
ACCCATGATTTCTACCTCAGCGAGTGCAACAGGCAAGTGGGCAATATCCCCGGGCGCCTAGTGGCTGA
G
ATGGAGGTGGGGACAGAGCAGACTGATAGGAGGTGGCGTTCTCCGGCCCAAGGGAACCTGCCTTCTGTG
GCC
CACCTCGAGGACTTTCAGGGGCTCACCATCCCCCAGGGTTCCTCCCTGGTGCTCCAGGGGAACTCCA
AG
AGACTCCCACTGTGGACTCCAAAGATCATGATAGCAGCTCTGGACTATGATCCTGGGGATGGGCAAAT
G
GGGGGCCAGGGGAAGGGCAGGCTGGCGCTGAGGGCAGGAGACGTGGTCATGGTTTACGGGCCCATGGAT
GAC
CAAGGATTCTATTATGGAGAGTTGGGCGGCCACAGGGGCCTGGTTCCTGCCCACCTGCTGGATCACA
TG
TCCCTCCATGGACACTGA


Translation (1639 aa):
MAKDSPSPLGASPKKPGCSSPAAAVLENQRRELEKLRAELEAERAGWRAERRRFAARERQLREEAERERR
Q
LADRLRSKWEAQRSRELRQLQEEMQREREAEIRQLLRWKEAEQRQLQQLLHRERDGVVRQARELQRQLA
E
ELVNRGHCSRPGASEVSAAQCRCRLQEVLAQLRWQTDGEQAARIRYLQAALEVERQLFLKYILAHFRGH
P
ALSGSPDPQAVHSLEEPLPQTSSGSCHAPKPACQLGSLDSLSAEVGVRSRSLGLVSSACSSSPDGLLST
H
ASSLDCFAPACSRSLDSTRSLPKASKSEERPSSPDTSTPGSRRLSPPPSPLPPPPPPSAHRKLSNPRGG
E
GSESQPCEVLTPSPPGLGHHELIKLNWLLAKALWVLARRCYTLQAENKQLRRAGCPYQADEKVKRLKVK
R
AELTGLARRLADRARKLQETNLRAVSAPIPGESCAGLELCQVFARQRARDLSEQASAPLAKDKQIEELR
Q
ECHLLQARVASGPCSDLHTGRGGPCTQWLNVRDLDRLQRESQREVLRLQRQLMLQQGNGGAWPEAGGQS
A
TCEEVRRQMLALERELDQRRRECQELGAQAAPARRRGEEAETQLQAALLKNAWLAEENGRLQAKTDWVR
K
VEAENSEVRGHLGRACQERDASGLIAEQLLQQAARGQDRQQQLQRDPQKALCDLHPSWKEIQALQCRPG
H
PPEQPWETSQMPESQVKGSRRPKFHARPEDYAVSQPNRDIQEKREASLEESPVALGESASVPQVSETVP
A
SQPLSKKTSSQSNSSSEGSMWATVPSSPTLDRDTASEVDDLEPDSVSLALEMGGSAAPAAPKLKIFMAQ
Y
NYNPFEGPNDHPEGELPLTAGDYIYIFGDMDEDGFYEGELEDGRRGLVPSNFVEQIPDSYIPGCLPAKS
P
DLGPSQLPAGQDEALEEDSLLSGKAQGVVDRGLCQMVRVGSKTEVATEILDTKTEACQLGLLQSMGKQG
L
SRPLLGTKGVLRMAPMQLHLQNVTATSANITWVYSSHRHPHVVYLDDREHALTPAGVSCYTFQGLCPGT
H
YRARVEVRLPRDLLQVYWGTMSSTVTFDTLLAGPPYPPLDVLVERHASPGVLVVSWLPVTIDSAGSSNG
V
QVTGYAVYADGLKVCEVADATAGSTLLEFSQLQVPLTWQKVSVRTMSLCGESLDSVPAQIPEDFFMCHR
W
PETPPFSYTCGDPSTYRVTFPVCPQKLSLAPPSAKASPHNPGSCGEPQAKFLEAFFEEPPRRQSPVSNL
G
SEGECPSSGAGSQAQELAEAWEGCRKDLLFQKSPQNHRPPSVSDQPGEKENCSQHMGTSKSPAPGFIHL
R
TECGPRKEPCQEKAALERVLRQKQDAQGFTPPQLGASQQYASDFHNVLKEEQEALCLDLWGTERREERR
E
PEPHSRQGQALGVKRGCQLHEPSSALCPAPSAKVIKMPRGGPQQLGTGANTPARVFVALSDYNPLVMSA
N
LKAAEEELVFQKRQLLRVWGSQDTHDFYLSECNRQVGNIPGRLVAEMEVGTEQTDRRWRSPAQGNLPSV
A
HLEDFQGLTIPQGSSLVLQGNSKRLPLWTPKIMIAALDYDPGDGQMGGQGKGRLALRAGDVVMVYGPMD
D
QGFYYGELGGHRGLVPAHLLDHMSLHGH




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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