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Report for CCDS45827.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45827.1 Public Homo sapiens 18 NAPG 24 110 108 CCDS HistoryNCBI Gene:8774Re-query CCDS DB by CCDS ID:45827.1Re-query CCDS DB by GeneID:8774See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45827.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000322897.11 ENSP00000324628.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000322897.11Link to Ensembl Protein Viewer:ENSP00000324628.6Re-query CCDS DB by Nucleotide ID:ENST00000322897Re-query CCDS DB by Protein ID:ENSP00000324628
Original member Current member NCBI NM_003826.3 NP_003817.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003826.3Link to Protein Sequence:NP_003817.1Re-query CCDS DB by Nucleotide ID:NM_003826Re-query CCDS DB by Protein ID:NP_003817Link to BLAST:NP_003817.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003817.1 312 Q99747-1 312 100% 0 0

Chromosomal Locations for CCDS 45827.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 18 (NC_000018.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 10526103 10526158 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 10530770 10530837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 10532711 10532795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 10533536 10533553 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 10534466 10534496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 10539762 10539871 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 10539988 10540054 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 10540329 10540399 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 10546326 10546404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 10548299 10548378 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 10548967 10549096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 10550077 10550220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (939 nt):
ATGGCGGCTCAGAAGATAAACGAGGGGCTGGAACACCTCGCCAAAGCAGAGAAATACCTGAAAACTGGTT
TTTTAAAATGGAAGCCAGATTATGACAGTGCCGCTTCTGAATATGGAAAAGCAGCTGTTGCTTTTAAAAA
TGCCAAACAGTTTGAGCAAGCAAAAGATGCCTGCCTGAGGGAAGCTGTTGCCCATGAAAATAATAGGGCT
CTTTTTCATGCTGCCAAAGCTTATGAGCAAGCTGGAATGATGTTGAAGGAGATGCAGAAACTACCAGAGG
CCGTTCAGCTAATTGAGAAGGCCAGCATGATGTATCTAGAAAACGGCACCCCAGACACAGCAGCCATGGC
TTTGGAGCGAGCTGGAAAGCTTATAGAAAATGTTGATCCAGAGAAGGCTGTACAGTTATATCAACAGACA
GCTAATGTGTTTGAAAATGAAGAACGCTTACGACAGGCAGTTGAATTACTAGGAAAAGCCTCCAGACTAC
TAGTACGAGGACGTAGGTTTGATGAGGCGGCACTCTCTATTCAGAAAGAAAAAAATATTTATAAGGAAAT
TGAGAATTATCCAACTTGTTATAAGAAAACAATTGCTCAAGTCTTAGTTCATCTACACAGAAATGACTAT
GTAGCTGCAGAAAGATGTGTCCGGGAGAGCTATAGCATCCCTGGGTTCAATGGCAGTGAAGACTGTGCTG
CCCTGGAACAGCTTCTTGAAGGTTATGACCAGCAAGACCAAGATCAGGTGTCAGATGTCTGCAACTCACC
GCTTTTCAAGTACATGGACAATGATTATGCTAAGCTGGGCCTGAGTTTGGTGGTTCCAGGAGGGGGAATC
AAGAAGAAATCACCTGCAACACCACAGGCCAAGCCTGATGGTGTCACTGCCACGGCTGCTGATGAAGAGG
AAGATGAATACTCAGGAGGACTATGCTAG

Translation (312 aa):
MAAQKINEGLEHLAKAEKYLKTGFLKWKPDYDSAASEYGKAAVAFKNAKQFEQAKDACLREAVAHENNRA
LFHAAKAYEQAGMMLKEMQKLPEAVQLIEKASMMYLENGTPDTAAMALERAGKLIENVDPEKAVQLYQQT
ANVFENEERLRQAVELLGKASRLLVRGRRFDEAALSIQKEKNIYKEIENYPTCYKKTIAQVLVHLHRNDY
VAAERCVRESYSIPGFNGSEDCAALEQLLEGYDQQDQDQVSDVCNSPLFKYMDNDYAKLGLSLVVPGGGI
KKKSPATPQAKPDGVTATAADEEEDEYSGGLC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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