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Report for CCDS45595.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45595.1 Public Homo sapiens 17 C17orf49 24 110 108 CCDS HistoryNCBI Gene:124944Re-query CCDS DB by CCDS ID:45595.1Re-query CCDS DB by GeneID:124944See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45595.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000546495.5 ENSP00000448598.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000546495.5Link to Ensembl Protein Viewer:ENSP00000448598.1Re-query CCDS DB by Nucleotide ID:ENST00000546495Re-query CCDS DB by Protein ID:ENSP00000448598
Original member Current member NCBI NM_001142798.3 NP_001136270.1 Accepted alive Link to Nucleotide Sequence:NM_001142798.3Link to Protein Sequence:NP_001136270.1Re-query CCDS DB by Nucleotide ID:NM_001142798Re-query CCDS DB by Protein ID:NP_001136270Link to BLAST:NP_001136270.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001136270.1 192 Q8IXM2-3 192 100% 0 0

Chromosomal Locations for CCDS 45595.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 7014858 7014878 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7015062 7015156 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7015774 7015875 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7016495 7016685 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7016910 7017014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7017257 7017321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (579 nt):
ATGACGTCAGCGTCCACAAAGGTCGGAGAGATCTTCTCGGCGGCCGGCGCCGCCTTCACGAAGCTCGGGG
AGCTGACGATGCAGCTGCATCCCGTGGCCGACTCTTCTCCTGCGGGTGCGAAGTGGACGGAGACGGAAAT
AGAGATGCTGAGGGCTGCTGTGAAGCGATTTGGGGACGATCTTAATCACATCAGCTGTGTCATCAAGGAA
CGGACAGTGGCCCAGATAAAGGCCACTGTGAAACGCAAGGTATATGAAGATTCTGGCATCCCCCTTCCAG
CTGAGTCACCCAAGAAAGGGCCCAAGAAGGTGGCATCTGGTGTCTTGTCACCTCCTCCAGCTGCCCCTCC
TCCCAGCAGCTCCAGTGTCCCTGAGGCCGGGGGTCCCCCCATAAAGAAACAGAAGGCTGATGTGACACTC
AGTGCTCTGAACGACTCCGATGCCAACAGTGACGTGGTGGATATTGAAGGGCTAGGAGAAACTCCTCCAG
CTAAGAAACTCAACTTCGACCAGGACAGCCTGACCCTGGATTCTGGCCTTCTCATGACCTCTGCTGATCC
TCCTCTCCTCTCCTGCTGA

Translation (192 aa):
MTSASTKVGEIFSAAGAAFTKLGELTMQLHPVADSSPAGAKWTETEIEMLRAAVKRFGDDLNHISCVIKE
RTVAQIKATVKRKVYEDSGIPLPAESPKKGPKKVASGVLSPPPAAPPPSSSSVPEAGGPPIKKQKADVTL
SALNDSDANSDVVDIEGLGETPPAKKLNFDQDSLTLDSGLLMTSADPPLLSC


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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