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Report for CCDS45359.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45359.1 Public Homo sapiens 15 NR2F2 24 110 108 CCDS HistoryNCBI Gene:7026Re-query CCDS DB by CCDS ID:45359.1Re-query CCDS DB by GeneID:7026See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45359.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000394171.6 ENSP00000377726.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000394171.6Link to Ensembl Protein Viewer:ENSP00000377726.2Re-query CCDS DB by Nucleotide ID:ENST00000394171Re-query CCDS DB by Protein ID:ENSP00000377726
Original member Current member EBI ENST00000453270.2 ENSP00000389853.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000453270.2Link to Ensembl Protein Viewer:ENSP00000389853.2Re-query CCDS DB by Nucleotide ID:ENST00000453270Re-query CCDS DB by Protein ID:ENSP00000389853
Original member Current member NCBI NM_001145156.1 NP_001138628.1 Accepted alive Link to Nucleotide Sequence:NM_001145156.1Link to Protein Sequence:NP_001138628.1Re-query CCDS DB by Nucleotide ID:NM_001145156Re-query CCDS DB by Protein ID:NP_001138628Link to BLAST:NP_001138628.1
Original member Current member NCBI NM_001145157.2 NP_001138629.1 Accepted alive Link to Nucleotide Sequence:NM_001145157.2Link to Protein Sequence:NP_001138629.1Re-query CCDS DB by Nucleotide ID:NM_001145157Re-query CCDS DB by Protein ID:NP_001138629Link to BLAST:NP_001138629.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001138628.1 261 P24468-3 261 100% 0 0
NP_001138629.1 261 P24468-3 261 100% 0 0

Chromosomal Locations for CCDS 45359.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 96334093 96334603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 96337348 96337622 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (786 nt):
ATGCCGCCGACCCAGCCGACCCACGGGCAGTTCGCGCTGACCAACGGGGATCCCCTCAACTGCCACTCGT
ACCTGTCCGGATATATTTCCCTGCTGTTGCGCGCGGAGCCCTATCCCACGTCGCGCTTCGGCAGCCAATG
CATGCAGCCCAACAACATCATGGGTATCGAGAACATTTGCGAACTGGCCGCGAGGATGCTCTTCAGCGCC
GTCGAGTGGGCCCGGAACATCCCCTTCTTCCCCGACCTGCAGATCACGGACCAGGTGGCCCTGCTTCGCC
TCACCTGGAGCGAGCTGTTTGTGTTGAATGCGGCGCAGTGCTCCATGCCCCTCCACGTCGCCCCGCTCCT
GGCCGCCGCCGGCCTGCATGCTTCGCCCATGTCCGCCGACCGGGTGGTCGCCTTTATGGACCACATACGG
ATCTTCCAAGAGCAAGTGGAGAAGCTCAAGGCGCTGCACGTTGACTCAGCCGAGTACAGCTGCCTCAAGG
CCATAGTCCTGTTCACCTCAGATGCCTGTGGTCTCTCTGATGTAGCCCATGTGGAAAGCTTGCAGGAAAA
GTCTCAGTGTGCTTTGGAAGAATACGTTAGGAGCCAGTACCCCAACCAGCCGACGAGATTCGGAAAGCTT
TTGCTTCGCCTCCCTTCCCTCCGCACCGTCTCCTCCTCAGTCATAGAGCAATTGTTTTTCGTCCGTTTGG
TAGGTAAAACCCCCATCGAAACCCTCATCCGGGATATGTTACTGTCCGGCAGCAGTTTTAACTGGCCGTA
TATGGCAATTCAATAA

Translation (261 aa):
MPPTQPTHGQFALTNGDPLNCHSYLSGYISLLLRAEPYPTSRFGSQCMQPNNIMGIENICELAARMLFSA
VEWARNIPFFPDLQITDQVALLRLTWSELFVLNAAQCSMPLHVAPLLAAAGLHASPMSADRVVAFMDHIR
IFQEQVEKLKALHVDSAEYSCLKAIVLFTSDACGLSDVAHVESLQEKSQCALEEYVRSQYPNQPTRFGKL
LLRLPSLRTVSSSVIEQLFFVRLVGKTPIETLIRDMLLSGSSFNWPYMAIQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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