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Report for CCDS4528.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4528.1 Public Homo sapiens 6 NOL7 24 110 108 CCDS HistoryNCBI Gene:51406Re-query CCDS DB by CCDS ID:4528.1Re-query CCDS DB by GeneID:51406See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4528.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000451315.7 ENSP00000405674.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000451315.7Link to Ensembl Protein Viewer:ENSP00000405674.2Re-query CCDS DB by Nucleotide ID:ENST00000451315Re-query CCDS DB by Protein ID:ENSP00000405674
Original member Current member NCBI NM_001317724.2 NP_001304653.1 Accepted alive Link to Nucleotide Sequence:NM_001317724.2Link to Protein Sequence:NP_001304653.1Re-query CCDS DB by Nucleotide ID:NM_001317724Re-query CCDS DB by Protein ID:NP_001304653Link to BLAST:NP_001304653.1
Original member Current member NCBI NM_016167.5 NP_057251.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016167.5Link to Protein Sequence:NP_057251.2Re-query CCDS DB by Nucleotide ID:NM_016167Re-query CCDS DB by Protein ID:NP_057251Link to BLAST:NP_057251.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001304653.1 257 Q9UMY1-1 257 100% 0 0
NP_057251.2 257 Q9UMY1-1 257 100% 0 0

Chromosomal Locations for CCDS 4528.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 13615359 13615624 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 13615712 13615772 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 13616463 13616521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 13617770 13617801 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 13618058 13618139 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 13620208 13620329 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 13620408 13620485 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 13620754 13620827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (774 nt):
ATGGTGCAGCTCCGACCGCGAGCGTCTCGCGCCCCGGCGTCGGCGGAGGCGATGGTGGACGAGGGCCAGC
TGGCCTCGGAGGAGGAGGAGGCGGAGCACGGGCTGTTGCTCGGGCAGCCCAGCAGCGGCGCGGCCGCCGA
GCCCCTGGAGGAAGACGAGGAAGGGGACGATGAGTTTGACGATGAGGCCCCGGAGGAGCTGACTTTCGCC
AGCGCCCAGGCGGAAGCGAGAGAAGAGGAGCGGCGAGTGCGGGAGACCGTGCGCAGGGATAAAACGCTCC
TGAAGGAGAAGAGGAAGCGACGCGAGGAGCTGTTCATCGAACAGAAGAAAAGAAAACTCCTTCCAGACAC
TATTTTGGAGAAGTTAACCACAGCTTCACAGACTAACATCAAGAAATCGCCAGGAAAGGTGAAAGAAGTT
AATTTGCAAAAGAAAAATGAAGACTGTGAAAAAGGAAATGACTCCAAGAAAGTTAAAGTACAAAAAGTAC
AGTCTGTCAGCCAGAATAAAAGCTACTTGGCCGTAAGGCTAAAAGACCAAGATCTGAGAGATTCAAGGCA
ACAAGCAGCACAAGCCTTCATACATAATTCATTATATGGGCCAGGAACCAACAGGACTACTGTAAATAAG
TTCCTGTCTCTTGCCAACAAGAGGTTACCAGTGAAAAGAGCTGCTGTCCAGTTTTTGAATAATGCTTGGG
GAATCCAAAAAAAACAAAATGCCAAGAGGTTTAAAAGACGGTGGATGGTCAGAAAGATGAAAACTAAGAA
GTAA

Translation (257 aa):
MVQLRPRASRAPASAEAMVDEGQLASEEEEAEHGLLLGQPSSGAAAEPLEEDEEGDDEFDDEAPEELTFA
SAQAEAREEERRVRETVRRDKTLLKEKRKRREELFIEQKKRKLLPDTILEKLTTASQTNIKKSPGKVKEV
NLQKKNEDCEKGNDSKKVKVQKVQSVSQNKSYLAVRLKDQDLRDSRQQAAQAFIHNSLYGPGTNRTTVNK
FLSLANKRLPVKRAAVQFLNNAWGIQKKQNAKRFKRRWMVRKMKTKK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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