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Report for CCDS44749.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44749.1 Public Homo sapiens 11 ARCN1 24 110 108 CCDS HistoryNCBI Gene:372Re-query CCDS DB by CCDS ID:44749.1Re-query CCDS DB by GeneID:372See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44749.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000392859.7 ENSP00000376599.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000392859.7Link to Ensembl Protein Viewer:ENSP00000376599.3Re-query CCDS DB by Nucleotide ID:ENST00000392859Re-query CCDS DB by Protein ID:ENSP00000376599
Original member Current member NCBI NM_001142281.2 NP_001135753.1 Accepted alive Link to Nucleotide Sequence:NM_001142281.2Link to Protein Sequence:NP_001135753.1Re-query CCDS DB by Nucleotide ID:NM_001142281Re-query CCDS DB by Protein ID:NP_001135753Link to BLAST:NP_001135753.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001135753.1 423 P48444-2 423 100% 0 0

Chromosomal Locations for CCDS 44749.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 118572548 118572550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 118583179 118583358 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 118583809 118584014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 118584480 118584644 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 118590341 118590506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 118592709 118592856 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 118593590 118593698 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 118597707 118597911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 118600625 118600714 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1272 nt):
ATGATCCCTGAATATTGCCGAGCCTTAGAAGAGAATGAAATATCTGAGCACTGTTTTGATTTGATTTTTG
CTTTTGATGAAATTGTCGCACTGGGATACCGGGAGAATGTTAACTTGGCACAGATCAGAACCTTCACAGA
AATGGATTCTCATGAGGAGAAGGTGTTCAGAGCCGTCAGAGAGACTCAAGAACGTGAAGCTAAGGCTGAG
ATGCGTCGTAAAGCAAAGGAATTACAACAGGCCCGAAGAGATGCAGAGAGACAGGGCAAAAAAGCACCAG
GATTTGGCGGATTTGGCAGCTCTGCAGTATCTGGAGGCAGCACAGCTGCCATGATCACAGAGACCATCAT
TGAAACTGATAAACCAAAAGTGGCACCTGCACCAGCCAGGCCTTCAGGCCCCAGCAAGGCTTTAAAACTT
GGAGCCAAAGGAAAGGAAGTAGATAACTTTGTGGACAAATTAAAATCTGAAGGTGAAACCATCATGTCCT
CTAGTATGGGCAAGCGTACTTCTGAAGCAACCAAAATGCATGCTCCACCCATTAATATGGAAAGTGTACA
TATGAAGATTGAAGAAAAGATAACATTAACCTGTGGACGAGACGGAGGATTACAGAATATGGAGTTGCAT
GGCATGATCATGCTTAGGATCTCAGATGACAAGTATGGCCGAATTCGTCTTCATGTGGAAAATGAAGATA
AGAAAGGGGTGCAGCTACAGACCCATCCAAATGTGGATAAAAAACTTTTCACTGCAGAGTCTCTAATTGG
CCTGAAGAATCCAGAGAAGTCATTTCCAGTCAACAGTGACGTAGGGGTGCTAAAGTGGAGACTACAAACC
ACAGAGGAATCTTTTATTCCACTGACAATTAATTGCTGGCCCTCGGAGAGTGGAAATGGCTGTGATGTCA
ACATAGAATATGAGCTACAAGAAGATAATTTAGAACTGAATGATGTGGTTATCACCATCCCACTCCCGTC
TGGTGTCGGCGCGCCTGTTATCGGTGAGATCGATGGGGAGTATCGACATGACAGTCGACGAAATACCCTG
GAGTGGTGCCTGCCTGTGATTGATGCCAAAAATAAGAGTGGCAGCCTGGAGTTTAGCATTGCTGGGCAGC
CCAATGACTTCTTCCCTGTTCAAGTTTCCTTTGTCTCCAAGAAAAATTACTGTAACATACAGGTTACCAA
AGTGACCCAGGTAGATGGAAACAGCCCCGTCAGGTTTTCCACAGAGACCACTTTCCTAGTGGATAAGTAT
GAAATTCTGTAA

Translation (423 aa):
MIPEYCRALEENEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAE
MRRKAKELQQARRDAERQGKKAPGFGGFGSSAVSGGSTAAMITETIIETDKPKVAPAPARPSGPSKALKL
GAKGKEVDNFVDKLKSEGETIMSSSMGKRTSEATKMHAPPINMESVHMKIEEKITLTCGRDGGLQNMELH
GMIMLRISDDKYGRIRLHVENEDKKGVQLQTHPNVDKKLFTAESLIGLKNPEKSFPVNSDVGVLKWRLQT
TEESFIPLTINCWPSESGNGCDVNIEYELQEDNLELNDVVITIPLPSGVGAPVIGEIDGEYRHDSRRNTL
EWCLPVIDAKNKSGSLEFSIAGQPNDFFPVQVSFVSKKNYCNIQVTKVTQVDGNSPVRFSTETTFLVDKY
EIL


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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