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Report for CCDS43968.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43968.1 Public Homo sapiens X TEX11 24 110 108 CCDS HistoryNCBI Gene:56159Re-query CCDS DB by CCDS ID:43968.1Re-query CCDS DB by GeneID:56159See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43968.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000374333.7 ENSP00000363453.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000374333.7Link to Ensembl Protein Viewer:ENSP00000363453.2Re-query CCDS DB by Nucleotide ID:ENST00000374333Re-query CCDS DB by Protein ID:ENSP00000363453
Original member Current member NCBI NM_031276.3 NP_112566.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_031276.3Link to Protein Sequence:NP_112566.2Re-query CCDS DB by Nucleotide ID:NM_031276Re-query CCDS DB by Protein ID:NP_112566Link to BLAST:NP_112566.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_112566.2 925 Q8IYF3-3 925 100% 0 0

Chromosomal Locations for CCDS 43968.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 70529095 70529187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70529835 70529999 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70552126 70552246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70553306 70553414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70554651 70554800 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70591751 70591823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70605401 70605517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70606959 70607029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70609091 70609177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70610503 70610543 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70623950 70624006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70624839 70624924 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70629611 70629735 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70651450 70651552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70670377 70670514 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70678804 70678889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70682674 70682825 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70722618 70722696 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70725262 70725343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70740701 70740796 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70744165 70744219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70806705 70806790 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70833513 70833593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70853034 70853153 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70853248 70853328 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70860857 70860936 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70873223 70873307 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70879988 70880109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70907753 70907789 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2778 nt):
ATGGACAATGATGATTTTTTTTCCATGGACTTTAAAGAAGTTGTTGAAAACCTGGTTACAAATGATAATT
CACCTAACATACCAGAGGCAATTGATAGACTCTTCAGCGACATAGCAAATATCAACAGGGAGTCTATGGC
TGAAATAACAGACATTCAGATTGAAGAAATGGCAGTAAACCTATGGAACTGGGCACTTACCATAGGAGGA
GGTTGGCTTGTAAATGAAGAGCAGAAAATTAGATTACATTATGTTGCTTGCAAGTTGCTGAGTATGTGTG
AAGCCTCATTTGCCTCAGAACAAAGTATTCAACGACTGATTATGATGAATATGAGAATAGGAAAAGAATG
GTTGGATGCTGGAAATTTTCTAATCGCTGATGAATGTTTTCAAGCTGCTGTGGCCAGTCTGGAGCAATTA
TACGTCAAATTAATTCAAAGGAGCTCCCCTGAGGCTGACTTGACCATGGAGAAGATTACTGTTGAGAGTG
ACCACTTCAGAGTGCTTTCTTACCAAGCAGAGTCAGCAGTTGCTCAAGGGGATTTTCAAAGAGCATCTAT
GTGTGTACTGCAATGTAAAGATATGTTGATGAGGCTCCCCCAGATGACTTCAAGTCTTCATCATCTCTGT
TACAACTTTGGAGTAGAAACCCAGAAGAATAATAAATATGAAGAAAGTTCTTTCTGGCTTAGCCAAAGCT
ATGATATTGGGAAGATGGATAAGAAATCTACTGGGCCAGAAATGCTGGCTAAAGTTCTACGGCTATTAGC
CACGAATTATTTGGATTGGGATGACACCAAATATTATGATAAGGCTCTCAATGCTGTAAACCTAGCAAAC
AAGGAACATTTAAGTTCTCCTGGGCTTTTCTTAAAAATGAAAATCCTCTTGAAAGGCGAAACATCTAATG
AAGAACTCCTTGAAGCTGTCATGGAAATACTACATCTTGACATGCCCTTAGACTTCTGTCTGAACATTGC
TAAACTGCTGATGGATCATGAAAGAGAATCTGTTGGGTTTCATTTCCTGACGATTATTCATGAACGTTTT
AAGTCATCGGAAAATATTGGAAAAGTTCTGATACTCCATACTGACATGCTTTTACAAAGGAAGGAAGAAC
TTCTTGCCAAGGAGAAGATTGAAGAAATCTTTTTAGCTCACCAAACAGGAAGACAACTGACAGCAGAATC
AATGAACTGGTTACACAACATTCTGTGGAGACAAGCTGCCAGTAGTTTTGAGGTACAAAATTACACTGAT
GCCCTACAATGGTACTATTATTCTCTGAGGTTTTATTCAACTGATGAAATGGATCTGGACTTCACCAAGC
TGCAGAGGAACATGGCTTGCTGTTACCTGAATTTGCAACAACTTGATAAGGCCAAAGAGGCAGTGGCAGA
AGCTGAACGACATGACCCTAGGAACGTTTTCACTCAATTTTATATATTCAAGATTGCAGTCATAGAGGGC
AACTCTGAAAGAGCTTTGCAGGCAATAATTACTTTAGAGAATATATTAACAGATGAAGAGTCAGAAGATA
ATGATCTAGTTGCAGAGAGAGGTTCACCTACCATGCTTCTAAGTTTAGCTGCCCAGTTTGCTCTAGAGAA
TGGACAACAAATTGTGGCAGAAAAAGCTTTGGAATATTTAGCTCAACATTCAGAAGACCAGGAACAAGTT
CTTACAGCTGTAAAGTGTTTGCTTCGTTTTCTTCTTCCAAAAATTGCTGAAATGCCGGAATCTGAAGATA
AGAAGAAAGAAATGGATCGACTTTTGACTTGCCTGAATAGAGCCTTTGTGAAACTTTCTCAGCCTTTTGG
TGAAGAAGCCTTAAGTTTGGAGTCAAGAGCTAATGAAGCTCAGTGGTTTCGAAAAACAGCTTGGAACTTG
GCTGTGCAATGTGACAAAGATCCAGTGATGATGAGAGAGTTTTTTATACTTTCTTATAAGATGTCCCAGT
TTTGTCCTTCTGATCAAGTAATTCTGATTGCACGGAAAACATGTTTACTTATGGCAGTTGCAGTTGATCT
AGAGCAAGGGAGAAAAGCTTCAACAGCTTTTGAACAGACCATGTTCCTGAGTCGTGCACTTGAGGAGATC
CAGACATGCAATGACATCCATAATTTCCTGAAACAAACAGGGACCTTCTCAAATGATTCATGTGAGAAAT
TGCTTCTGCTGTACGAGTTTGAAGTTAGAGCCAAATTGAATGATCCATTACTGGAAAGCTTCCTGGAATC
AGTGTGGGAGTTGCCTCATTTAGAAACTAAAACTTTTGAAACAATTGCAATAATAGCAATGGAAAAGCCT
GCACACTATCCTTTGATTGCTCTCAAGGCCTTGAAAAAGGCTTTATTGCTCTACAAAAAGGAAGAACCAA
TTGATATATCACAATACAGCAAATGTATGCACAACTTGGTTAACCTCTCAGTGCCAGATGGGGCGTCGAA
TGTAGAGCTCTGTCCCCTGGAAGAAGTTTGGGGCTATTTTGAAGATGCTCTGAGCCACATTAGCCGCACT
AAAGACTACCCAGAAATGGAGATTCTCTGGCTGATGGTCAAGTCCTGGAATACCGGAGTACTTATGTTTA
GCAGGAGCAAGTATGCATCTGCTGAAAAGTGGTGTGGCCTGGCCTTGCGTTTCCTTAACCACCTTACCTC
CTTCAAGGAAAGCTATGAAACTCAGATGAATATGCTGTATAGTCAGCTTGTGGAAGCATTGAGTAACAAC
AAGGGCCCAGTTTTTCATGAACATGGCTACTGGAGCAAGTCAGATTAG

Translation (925 aa):
MDNDDFFSMDFKEVVENLVTNDNSPNIPEAIDRLFSDIANINRESMAEITDIQIEEMAVNLWNWALTIGG
GWLVNEEQKIRLHYVACKLLSMCEASFASEQSIQRLIMMNMRIGKEWLDAGNFLIADECFQAAVASLEQL
YVKLIQRSSPEADLTMEKITVESDHFRVLSYQAESAVAQGDFQRASMCVLQCKDMLMRLPQMTSSLHHLC
YNFGVETQKNNKYEESSFWLSQSYDIGKMDKKSTGPEMLAKVLRLLATNYLDWDDTKYYDKALNAVNLAN
KEHLSSPGLFLKMKILLKGETSNEELLEAVMEILHLDMPLDFCLNIAKLLMDHERESVGFHFLTIIHERF
KSSENIGKVLILHTDMLLQRKEELLAKEKIEEIFLAHQTGRQLTAESMNWLHNILWRQAASSFEVQNYTD
ALQWYYYSLRFYSTDEMDLDFTKLQRNMACCYLNLQQLDKAKEAVAEAERHDPRNVFTQFYIFKIAVIEG
NSERALQAIITLENILTDEESEDNDLVAERGSPTMLLSLAAQFALENGQQIVAEKALEYLAQHSEDQEQV
LTAVKCLLRFLLPKIAEMPESEDKKKEMDRLLTCLNRAFVKLSQPFGEEALSLESRANEAQWFRKTAWNL
AVQCDKDPVMMREFFILSYKMSQFCPSDQVILIARKTCLLMAVAVDLEQGRKASTAFEQTMFLSRALEEI
QTCNDIHNFLKQTGTFSNDSCEKLLLLYEFEVRAKLNDPLLESFLESVWELPHLETKTFETIAIIAMEKP
AHYPLIALKALKKALLLYKKEEPIDISQYSKCMHNLVNLSVPDGASNVELCPLEEVWGYFEDALSHISRT
KDYPEMEILWLMVKSWNTGVLMFSRSKYASAEKWCGLALRFLNHLTSFKESYETQMNMLYSQLVEALSNN
KGPVFHEHGYWSKSD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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